RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SEC22CQ9BRL7 303 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 C7orf66A4D0T2 115 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 MARCH11A6NNE9 402 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 HLA-GP17693 338 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 TATDN3Q17R31 274 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 ANKRD55Q3KP44 614 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 SELENOHQ8IZQ5 122 aaKnown RBP12.88□□□□□ -0.35
CXCL1-201ENST00000395761 ZNF491Q8N8L2 437 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 OR52B4Q8NGK2 314 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 RBPMSQ93062 196 aaKnown RBP12.88□□□□□ -0.35
CXCL1-201ENST00000395761 GNB4Q9HAV0 340 aa12.88□□□□□ -0.35
CXCL1-201ENST00000395761 DUXBA0A1W2PPF3 345 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 HMX3A6NHT5 357 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 TEX22C9J3V5 150 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 ATG12O94817 140 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 MAS1LP35410 378 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
CXCL1-201ENST00000395761 ERVK-16P61578 105 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 DEFB136Q30KP8 78 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 ETV3LQ6ZN32 361 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 Q6ZNX1 250 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 COQ8AQ8NI60 647 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 LHFPL5Q8TAF8 219 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 TMEM68Q96MH6 324 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 DUX3Q96PT4 197 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 FYTTD1Q96QD9 318 aaKnown RBP12.87□□□□□ -0.35
CXCL1-201ENST00000395761 ZNF355PQ9NSJ1 428 aa12.87□□□□□ -0.35
CXCL1-201ENST00000395761 A0A0B4J293 547 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 CGB1A6NKQ9 187 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 DBX1A6NMT0 343 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 OR9G9P0C7N8 305 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 C12orf45Q8N5I9 185 aaPredicted RBP12.86□□□□□ -0.35
CXCL1-201ENST00000395761 LSM10Q969L4 123 aaKnown RBP12.86□□□□□ -0.35
CXCL1-201ENST00000395761 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 UBE2E2Q96LR5 201 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 OR5B12Q96R08 314 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 NSG2Q9Y328 171 aa12.86□□□□□ -0.35
CXCL1-201ENST00000395761 PF4P02776 101 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 TRGV3P03979 118 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 P0C879 139 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 TPPP2P59282 170 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 OR2B8PP59922 312 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 TMEM268Q5VZI3 342 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 FAM219AQ8IW50 185 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 COA4Q9NYJ1 87 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 PRR13Q9NZ81 148 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 ALG5Q9Y673 324 aa12.85□□□□□ -0.35
CXCL1-201ENST00000395761 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 RBMXL2O75526 392 aaKnown RBP12.84□□□□□ -0.35
CXCL1-201ENST00000395761 IGKV1-5P01602 117 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 PRH1P02810 166 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 FGF2P09038 288 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 AREGP15514 252 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 DEFA5Q01523 94 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 IZUMO4Q1ZYL8 232 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 C19orf35Q6ZS72 473 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 LYZL2Q7Z4W2 148 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 TTC9CQ8N5M4 171 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 C4orf3Q8WVX3 66 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 COMMD5Q9GZQ3 224 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 TMED3Q9Y3Q3 217 aa12.84□□□□□ -0.35
CXCL1-201ENST00000395761 H3BUA1 57 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 I3L521 148 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 CCL24O00175 119 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 IGHV3-11P01762 117 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 MYCNOSP40205 109 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 H2BFWTQ7Z2G1 175 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 MRPL41Q8IXM3 137 aaKnown RBP12.83□□□□□ -0.36
CXCL1-201ENST00000395761 SLC35G3Q8N808 338 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.36
CXCL1-201ENST00000395761 P2RX4Q99571 388 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 SLA2Q9H6Q3 261 aa12.83□□□□□ -0.36
CXCL1-201ENST00000395761 SNAPC5O75971 98 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 BRI3O95415 125 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 REG1AP05451 166 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 SLC25A6P12236 298 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 NMSQ5H8A3 153 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 LINC00482Q8N8I6 264 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 WFDC9Q8NEX5 89 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 OR10W1Q8NGF6 305 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 GPR146Q96CH1 333 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 PRNDQ9UKY0 176 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 OR51B2Q9Y5P1 312 aa12.82□□□□□ -0.36
CXCL1-201ENST00000395761 A0A0G2JRQ6 117 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 IFNA21P01568 189 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 PSMB6P28072 239 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 AKR1C2P52895 323 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 RUNX1Q01196 453 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 GGNBP1Q5YKI7 109 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
CXCL1-201ENST00000395761 NDUFA4L2Q9NRX3 87 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
CXCL1-201ENST00000395761 A0A1B0GU03 582 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms