RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 TSPAN5P62079 268 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 RPL30P62888 115 aaKnown RBP14.68□□□□□ -0.06
UPK3B-203ENST00000394849 EWSR1Q01844 656 aaKnown RBP eCLIP14.68□□□□□ -0.06
UPK3B-203ENST00000394849 DHRS11Q6UWP2 260 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 LYSMD2Q8IV50 215 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 SLC38A6Q8IZM9 456 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 MFSD4AQ8N468 514 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 UXS1Q8NBZ7 420 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 OR52I2Q8NH67 350 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 MCFD2Q8NI22 146 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 BORCS5Q969J3 196 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 SLIRPQ9GZT3 109 aaKnown RBP14.68□□□□□ -0.06
UPK3B-203ENST00000394849 MLXQ9UH92 298 aa14.68□□□□□ -0.06
UPK3B-203ENST00000394849 DNAH10Q8IVF4 4471 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 KIR2DL5BA0A0G2JN68 375 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 KIR2DL5BA0A0G2JPC4 375 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 ZNF320A2RRD8 509 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 TMEM213A2RRL7 107 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 SCAF4O95104 1147 aaKnown RBP14.67□□□□□ -0.06
UPK3B-203ENST00000394849 HLA-AP01891 365 aaKnown RBP14.67□□□□□ -0.06
UPK3B-203ENST00000394849 EDN2P20800 178 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 ARL3P36405 182 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 CATR1Q13166 79 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 IL18Q14116 193 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 IDO2Q6ZQW0 420 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 RBPMS2Q6ZRY4 209 aaKnown RBP14.67□□□□□ -0.06
UPK3B-203ENST00000394849 KIR2DL5AQ8N109 375 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 OR1L6Q8NGR2 347 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 OR4S2Q8NH73 311 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 KIR2DL5BQ8NHK3 375 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 PHLDA1Q8WV24 401 aaPredicted RBP14.67□□□□□ -0.06
UPK3B-203ENST00000394849 FCAMRQ8WWV6 532 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 CACNG8Q8WXS5 425 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 MOB3AQ96BX8 217 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 ABHD1Q96SE0 405 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 ZNF430Q9H8G1 570 aaPredicted RBP14.67□□□□□ -0.06
UPK3B-203ENST00000394849 KLK11Q9UBX7 282 aa14.67□□□□□ -0.06
UPK3B-203ENST00000394849 DHFRP00374 187 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 MRPS10P82664 201 aaKnown RBP14.66□□□□□ -0.06
UPK3B-203ENST00000394849 DEFB135Q30KP9 77 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 OR2C3Q8N628 320 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 STPG3Q8N7X2 389 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 RNF183Q96D59 192 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 GPHA2Q96T91 129 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 RABL2AQ9UBK7 228 aaPredicted RBP14.66□□□□□ -0.06
UPK3B-203ENST00000394849 FBXL7Q9UJT9 491 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 RABL2BQ9UNT1 228 aa14.66□□□□□ -0.06
UPK3B-203ENST00000394849 NPIPB5A8MRT5 1133 aa14.65□□□□□ -0.06
UPK3B-203ENST00000394849 EIF4EBP1Q13541 118 aaPredicted RBP14.65□□□□□ -0.06
UPK3B-203ENST00000394849 RNASE10Q5GAN6 216 aaKnown RBP14.65□□□□□ -0.06
UPK3B-203ENST00000394849 ZNF818PQ6ZRF7 136 aa14.65□□□□□ -0.06
UPK3B-203ENST00000394849 RBM38Q9H0Z9 239 aaKnown RBP14.65□□□□□ -0.06
UPK3B-203ENST00000394849 MTFP1Q9UDX5 166 aa14.65□□□□□ -0.06
UPK3B-203ENST00000394849 DPPA5A6NC42 116 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 GABARAPH6UMI1 98 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 M0QYG6 137 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 C8orf88P0DMB2 117 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 TCTAP57738 103 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 AADACL3Q5VUY0 350 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 CLEC19AQ6UXS0 136 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 OR51H1Q8NH63 302 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 EEF1AKMT3Q96AZ1 226 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 SPAG8Q99932 426 aaPredicted RBP14.64□□□□□ -0.07
UPK3B-203ENST00000394849 FXYD6Q9H0Q3 95 aa14.64□□□□□ -0.07
UPK3B-203ENST00000394849 MRPL27Q9P0M9 148 aaKnown RBP14.64□□□□□ -0.07
UPK3B-203ENST00000394849 ZNF701M0R085 212 aaPredicted RBP14.63□□□□□ -0.07
UPK3B-203ENST00000394849 SAA1P0DJI8 122 aaPredicted RBP14.63□□□□□ -0.07
UPK3B-203ENST00000394849 HIST1H1BP16401 226 aaKnown RBP14.63□□□□□ -0.07
UPK3B-203ENST00000394849 GNRHRP30968 328 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 ELLP55199 621 aaPredicted RBP14.63□□□□□ -0.07
UPK3B-203ENST00000394849 LPCAT3Q6P1A2 487 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 BTNL8Q6UX41 500 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 CMTM1Q8IZ96 169 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 SPAG16Q8N0X2 631 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 VSTM2AQ8TAG5 236 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 CCDC140Q96MF4 163 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 MFFQ9GZY8 342 aa14.63□□□□□ -0.07
UPK3B-203ENST00000394849 TRBV7-1A0A0A6YYK4 115 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 GPR31O00270 319 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 CD3DP04234 171 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 MYOD1P15172 320 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 TBPP20226 339 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 PSMB6P28072 239 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 S100GP29377 79 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 TAS2R19P59542 299 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 KLK9Q2XQG4 91 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 NXF2Q9GZY0 626 aaKnown RBP14.62□□□□□ -0.07
UPK3B-203ENST00000394849 C5orf66Q9H5L9 145 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 KLK9Q9UKQ9 250 aa14.62□□□□□ -0.07
UPK3B-203ENST00000394849 KIAA1109Q2LD37 5005 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 FABP12A6NFH5 140 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 HRASP01112 189 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 RLN1P04808 185 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 TNFSF8P32971 234 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 S100A5P33763 92 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 MAS1LP35410 378 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 SSBP1Q04837 148 aaKnown RBP14.61□□□□□ -0.07
UPK3B-203ENST00000394849 C10orf55Q5SWW7 151 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 VKORC1L1Q8N0U8 176 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 TMEM229BQ8NBD8 167 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms