RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 LEAP2Q969E1 77 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 IL36BQ9NZH7 164 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 RAXQ9Y2V3 346 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 INTS1Q8N201 2190 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 TANC2Q9HCD6 1990 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 RELNP78509 3460 aa15.09■□□□□ 0.01
PCDHA1-202ENST00000394633 SMG1Q96Q15 3661 aaKnown RBP15.08■□□□□ 0.01
PCDHA1-202ENST00000394633 SLC17A3O00476 420 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 CBLN1P23435 193 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 KIR2DS2P43631 304 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 SELENOTP62341 195 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 RHOBP62745 196 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 SPRNQ5BIV9 151 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 TEPPQ6URK8 271 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 LRP11Q86VZ4 500 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 GCSAMQ8N6F7 178 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 C11orf52Q96A22 123 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 DSCAMO60469 2012 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 KIR2DL5BA0A0G2JN68 375 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 KIR2DL5BA0A0G2JPC4 375 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 K7ENP7 123 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 ZNF90Q03938 601 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 MZT1Q08AG7 82 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 KIR2DL5AQ8N109 375 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 OR4S2Q8NH73 311 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 CMTM2Q8TAZ6 248 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 ABHD17AQ96GS6 310 aa15.08■□□□□ 0
PCDHA1-202ENST00000394633 OPN3Q9H1Y3 402 aaPredicted RBP15.08■□□□□ 0
PCDHA1-202ENST00000394633 ATRXP46100 2492 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 NPY1RP25929 384 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 OR10J1P30954 320 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 LINC00310P59036 64 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 ERVFC1-1P60608 527 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 NUTF2P61970 127 aaKnown RBP15.07■□□□□ 0
PCDHA1-202ENST00000394633 Q6ZS92 163 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 SLC24A4Q8NFF2 622 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 PPP1R35Q8TAP8 253 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 SNHG12Q9BXW3 62 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 CBLN4Q9NTU7 201 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 CALYQ9NYX4 217 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 SPTA1P02549 2419 aa15.07■□□□□ 0
PCDHA1-202ENST00000394633 ITPR1Q14643 2758 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 TRAV9-1A0A075B6T8 112 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 CA2P00918 260 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 CGB3P0DN86 165 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 CGB7P0DN87 165 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 RPL29P47914 159 aaKnown RBP15.06■□□□□ 0
PCDHA1-202ENST00000394633 OR4A47Q6IF82 309 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 OR4P4Q8NGL7 312 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 TMEM14BQ9NUH8 114 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 DKK4Q9UBT3 224 aa15.06■□□□□ 0
PCDHA1-202ENST00000394633 FOXA2Q9Y261 457 aaPredicted RBP15.06■□□□□ 0
PCDHA1-202ENST00000394633 TRGV10A0A0A0MS01 117 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 C9JCJ5 164 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 MYOD1P15172 320 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 IGFBP2P18065 325 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 HSPE1P61604 102 aaKnown RBP15.05■□□□□ 0
PCDHA1-202ENST00000394633 C17orf58Q2M2W7 97 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 CT45A1Q5HYN5 189 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 CT45A3Q8NHU0 189 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 ZCCHC14Q8WYQ9 949 aaKnown RBP15.05■□□□□ 0
PCDHA1-202ENST00000394633 EAF1Q96JC9 268 aaPredicted RBP15.05■□□□□ 0
PCDHA1-202ENST00000394633 MRPL18Q9H0U6 180 aaKnown RBP15.05■□□□□ 0
PCDHA1-202ENST00000394633 PLSCR4Q9NRQ2 329 aa15.05■□□□□ 0
PCDHA1-202ENST00000394633 SAA2-SAA4A0A096LPE2 208 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 TCAPO15273 167 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 CGAP01215 116 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 SAA2P0DJI9 122 aaPredicted RBP15.05■□□□□ -0
PCDHA1-202ENST00000394633 CFHR2P36980 270 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 LGALS4P56470 323 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 PRR20EP86478 221 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 PRR20CP86479 221 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 PRR20DP86480 221 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 PRR20BP86481 221 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 PRR20AP86496 221 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 TBX15Q96SF7 602 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 NEU1Q99519 415 aa15.05■□□□□ -0
PCDHA1-202ENST00000394633 RAI1Q7Z5J4 1906 aaPredicted RBP15.05■□□□□ -0
PCDHA1-202ENST00000394633 ZNF705FA8MVS1 300 aaPredicted RBP15.04■□□□□ -0
PCDHA1-202ENST00000394633 MT-CO2P00403 227 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 FRMD6-AS1P0C7T7 363 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 LINC00869P0C866 280 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 ZNF705DP0CH99 300 aaPredicted RBP15.04■□□□□ -0
PCDHA1-202ENST00000394633 ZNF705BP0CI00 300 aaPredicted RBP15.04■□□□□ -0
PCDHA1-202ENST00000394633 CD33P20138 364 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 TBR1Q16650 682 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 KRTCAP3Q53RY4 240 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 Q6ZWC4 215 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 MIR17HGQ75NE6 70 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 MOGAT3Q86VF5 341 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 OR1L6Q8NGR2 347 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 UHRF2Q96PU4 802 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 OR2V2Q96R30 315 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 ZNF71Q9NQZ8 489 aaPredicted RBP15.04■□□□□ -0
PCDHA1-202ENST00000394633 IDI2-AS1Q9NZ38 188 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 LY96Q9Y6Y9 160 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 RAB7AP51149 207 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 NEUROG1Q92886 237 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 ATG101Q9BSB4 218 aa15.04■□□□□ -0
PCDHA1-202ENST00000394633 TMEM106BQ9NUM4 274 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms