RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TACC2O95359 2948 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 ZNF320A2RRD8 509 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 LHBP01229 141 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 CD40P25942 277 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 AARDQ4LEZ3 155 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 TCTEX1D1Q8N7M0 179 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 ZCCHC14Q8WYQ9 949 aaKnown RBP11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 MZT1Q08AG7 82 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 STPG3Q8N7X2 389 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 GCM1Q9NP62 436 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 IDI2-AS1Q9NZ38 188 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 NCOR2Q9Y618 2525 aa11.04□□□□□ -0.64
GTF2F1-201ENST00000394456 DSCAML1Q8TD84 2053 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 ZNF705GA8MUZ8 300 aaPredicted RBP11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 K7EN84 100 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 STAG3L2P0CL84 134 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 STAG3L3P0CL85 134 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 OPRK1P41145 380 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 DEFA6Q01524 100 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 EFNB3Q15768 340 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 MIR17HGQ75NE6 70 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 LSM4Q9Y4Z0 139 aaKnown RBP11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 CSMD1Q96PZ7 3565 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 IGLV3-9A0A075B6K5 115 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 C15orf61A6NNL5 157 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 MRPS11P82912 194 aaKnown RBP11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 LINC00469Q8N7U9 141 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 SGMS2Q8NHU3 365 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 FAM216AQ8WUB2 273 aa11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 ZMAT5Q9UDW3 170 aaKnown RBP11.03□□□□□ -0.64
GTF2F1-201ENST00000394456 IGKV1OR2-108A0A075B7D4 117 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 GRIFINA4D1Z8 144 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 IGHV1-46P01743 117 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 RPL15P61313 204 aaKnown RBP11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 OR5I1Q13606 314 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 CR1LQ2VPA4 569 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 OR10W1Q8NGF6 305 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 OR4P4Q8NGL7 312 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 ANAPC16Q96DE5 110 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 GAFA1Q96PS6 74 aa11.02□□□□□ -0.64
GTF2F1-201ENST00000394456 TANC2Q9HCD6 1990 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 KBTBD11-OT1A0A1B0GTJ5 212 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 C16orf97H3BN30 126 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 FCN3O75636 299 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 IGHV3-48P01763 117 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 SNRPCP09234 159 aaKnown RBP11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 NPY1RP25929 384 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 REG1BP48304 166 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 CCL8P80075 99 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 PAX5Q02548 391 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 NHLH1Q02575 133 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 TRAT1Q6PIZ9 186 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 ZNF664Q8N3J9 261 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 SLC24A4Q8NFF2 622 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 SFRP2Q96HF1 295 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 KCNIP2Q9NS61 270 aa11.02□□□□□ -0.65
GTF2F1-201ENST00000394456 OR4A8P0C604 315 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 GCHFRP30047 84 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 C3orf36Q3SXR2 165 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 OR4S2Q8NH73 311 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 A0A1B0GV90 55 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 F6UZH7 168 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 TGOLN2O43493 480 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 PDE6DO43924 150 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 VENTXO95231 258 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 DDTP30046 118 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 RPL31P62899 125 aaKnown RBP11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 TNFAIP6P98066 277 aaPredicted RBP11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 TMEM144Q7Z5S9 345 aa11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 TPRP12270 2363 aaKnown RBP11.01□□□□□ -0.65
GTF2F1-201ENST00000394456 A0A087X0M5 115 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 A0A1B0GX30 115 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 PLXNB1O43157 2135 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 SELENOVP59797 346 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 DIAPH2-AS1Q14236 149 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 ZNF439Q8NDP4 499 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 RAB1CQ92928 201 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 TMEM14BQ9NUH8 114 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 OR51B2Q9Y5P1 312 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 COL6A6A6NMZ7 2263 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 NAV3Q8IVL0 2385 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 DPRXA6NFQ7 191 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 E7EUB6 86 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 TMPRSS2O15393 492 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 SPINK4O60575 86 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 THBDP07204 575 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 LINC00869P0C866 280 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 CT45A6P0DMU7 189 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 CT45A5P0DMU8 189 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 CT45A7P0DMV0 189 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 CCL3L1P16619 93 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 CBLN1P23435 193 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 CFHR2P36980 270 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 SRP14P37108 136 aaKnown RBP11□□□□□ -0.65
GTF2F1-201ENST00000394456 HSPE1P61604 102 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms