RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FOXA3P55318 350 aaPredicted RBP11.54□□□□□ -0.56
USP49-203ENST00000394253 HCP5Q6MZN7 132 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 TUBA4BQ9H853 241 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 KCNE1BA0A087WTH5 132 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 GAGE12BA1L429 117 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 C9JCJ5 164 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 DUX3Q96PT4 197 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 LEPROTO15243 131 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 MOSP00540 346 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 GLULP15104 373 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 DRAM1Q8N682 238 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 SIRT4Q9Y6E7 314 aaPredicted RBP11.54□□□□□ -0.56
USP49-203ENST00000394253 PPIAL4EA0A075B759 164 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 H0Y8X5 98 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 PPIAL4FP0DN26 164 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 PPIAL4AQ9Y536 164 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 NDUFA2O43678 99 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 OR11H4Q8NGC9 324 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 TRAV24A0A0B4J272 114 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 IFITM1P13164 125 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 FAM19A2Q8N3H0 131 aa11.54□□□□□ -0.56
USP49-203ENST00000394253 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 GNB1LQ9BYB4 327 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 FGF12P61328 243 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 C1orf43Q9BWL3 253 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 ST6GALNAC2Q9UJ37 374 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 VWA8A3KMH1 1905 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 CXorf51AA0A1B0GTR3 108 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 CD8AP01732 235 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 TMEM91Q6ZNR0 172 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 FER1L6-AS1Q8NA97 138 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 CARHSP1Q9Y2V2 147 aaKnown RBP11.53□□□□□ -0.56
USP49-203ENST00000394253 LRP6O75581 1613 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 PEX11BO96011 259 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 CXorf66Q5JRM2 361 aaPredicted RBP11.53□□□□□ -0.56
USP49-203ENST00000394253 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
USP49-203ENST00000394253 PLPPR1Q8TBJ4 325 aa11.53□□□□□ -0.56
USP49-203ENST00000394253 CHTOPQ9Y3Y2 248 aaKnown RBP11.53□□□□□ -0.56
USP49-203ENST00000394253 EDIL3O43854 480 aa11.52□□□□□ -0.56
USP49-203ENST00000394253 RND2P52198 227 aa11.52□□□□□ -0.56
USP49-203ENST00000394253 HS3ST3B1Q9Y662 390 aa11.52□□□□□ -0.56
USP49-203ENST00000394253 GCHFRP30047 84 aa11.52□□□□□ -0.56
USP49-203ENST00000394253 FAM90A10PA6NDY2 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A18PA6NE21 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A16PA6NEW6 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A20PA6NIJ5 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A8PA6NJQ4 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A7PA6NKC0 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A22PA8MWA6 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A12PA8MX19 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A5PA8MXJ8 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A23PA8MXZ1 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 PLA2G10O15496 165 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 GFERP55789 205 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 SPRED2Q7Z698 418 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 RNF186Q9NXI6 227 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 SONP18583 2426 aaKnown RBP11.52□□□□□ -0.57
USP49-203ENST00000394253 CAMTA1Q9Y6Y1 1673 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 LIPT2A6NK58 231 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 FGFRL1Q8N441 504 aa11.52□□□□□ -0.57
USP49-203ENST00000394253 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 PRTN3P24158 256 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 SSBP3Q9BWW4 388 aaPredicted RBP11.51□□□□□ -0.57
USP49-203ENST00000394253 IGHV3OR15-7A0A075B7D8 119 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 ASCL2Q99929 193 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 PDFQ9HBH1 243 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 TRBV5-4A0A0C4DH59 114 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 SHISA8B8ZZ34 492 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 MLNRO43193 412 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 ZNHIT1O43257 154 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 GFRA3O60609 400 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 ZP1P60852 638 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 GAGE2AQ6NT46 116 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 PATE1Q8WXA2 126 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 FSTP19883 344 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 UNQ5815/PRO19632Q6UWF5 114 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 GDF15Q99988 308 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 DCTN5Q9BTE1 182 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 LTBP3Q9NS15 1303 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 MGST3O14880 152 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 VSIG8P0DPA2 414 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 DCAF12L2Q5VW00 463 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 CDC42EP2O14613 210 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 PTGDSP41222 190 aa11.51□□□□□ -0.57
USP49-203ENST00000394253 STRCQ7RTU9 1775 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 SERF1AO75920 110 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 ZNF385AQ96PM9 386 aaKnown RBP11.5□□□□□ -0.57
USP49-203ENST00000394253 UBE2CO00762 179 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 UNQ9370/PRO34162Q6UXP9 181 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 TRGV2A0A075B6R0 118 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 METTL12A8MUP2 240 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 RHOGP84095 191 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 EFNB1P98172 346 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 LAGE3Q14657 143 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms