RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ADORA2A-AS1P86434 159 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 ELOBQ15370 118 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 C1QL4Q86Z23 238 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 MUC15Q8N387 334 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 PLEKHA3Q9HB20 300 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 KCNIP2Q9NS61 270 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 ATRXP46100 2492 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 CHD8Q9HCK8 2581 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 INS-IGF2F8WCM5 200 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 IGHV1-8P0DP01 117 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 RND2P52198 227 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 CDSNQ15517 529 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 ZNF672Q499Z4 452 aaPredicted RBP7.35□□□□□ -1.23
TDP1-202ENST00000393452 C2orf83Q53S99 150 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 MIC13Q5XKP0 118 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 CYP2G1PQ6ZSU1 146 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 PDPNQ86YL7 162 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 OR4C13Q8NGP0 309 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 OR10X1Q8NGY0 326 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 OR9G1Q8NH87 305 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 GATAD1Q8WUU5 269 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 HARBI1Q96MB7 349 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 NABP2Q9BQ15 211 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 TMEM204Q9BSN7 226 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 PXMP4Q9Y6I8 212 aa7.35□□□□□ -1.23
TDP1-202ENST00000393452 ZNF98A6NK75 572 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 PAGE4O60829 102 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 DIAPH2-AS1Q14236 149 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 Q8WTZ3 238 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 FLYWCH2Q96CP2 140 aaKnown RBP7.34□□□□□ -1.23
TDP1-202ENST00000393452 NEIL1Q96FI4 390 aaPredicted RBP7.34□□□□□ -1.23
TDP1-202ENST00000393452 SMIM7Q9BQ49 75 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 PCGF1Q9BSM1 259 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 ZZEF1O43149 2961 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 A0A1W2PPV4 95 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 C5orf52A6NGY3 159 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 STAG3L2P0CL84 134 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 STAG3L3P0CL85 134 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 USF1P22415 310 aaPredicted RBP7.34□□□□□ -1.23
TDP1-202ENST00000393452 RPL29P47914 159 aaKnown RBP7.34□□□□□ -1.23
TDP1-202ENST00000393452 REG1BP48304 166 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 RPL8P62917 257 aaKnown RBP7.34□□□□□ -1.23
TDP1-202ENST00000393452 ZNF841Q6ZN19 808 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 OR1L8Q8NGR8 309 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 OR4A5Q8NH83 315 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 HINT2Q9BX68 163 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 PATZ1Q9HBE1 687 aaKnown RBP7.34□□□□□ -1.23
TDP1-202ENST00000393452 NDUFA4L2Q9NRX3 87 aa7.34□□□□□ -1.23
TDP1-202ENST00000393452 RALYQ9UKM9 306 aaKnown RBP7.34□□□□□ -1.23
TDP1-202ENST00000393452 PLXNB1O43157 2135 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 IGLV2-23P01705 113 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 IGHV2-70P01814 119 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 RNASE2P10153 161 aaKnown RBP7.33□□□□□ -1.24
TDP1-202ENST00000393452 COL8A2P25067 703 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 PPOXP50336 477 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 PRR20EP86478 221 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 PRR20CP86479 221 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 PRR20DP86480 221 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 PRR20BP86481 221 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 PRR20AP86496 221 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 TMEM144Q7Z5S9 345 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 STPG3Q8N7X2 389 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 OR4F5Q8NH21 305 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 VSTM2AQ8TAG5 236 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 TNFRSF14Q92956 283 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 OR4F4Q96R69 305 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 TMEM133Q9H2Q1 129 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 PARLQ9H300 379 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 WASHC3Q9Y3C0 194 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 COL6A6A6NMZ7 2263 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 CLDN34H7C241 214 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 OPN1MWP04001 364 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 CXCL1P09341 107 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 OPN1MW2P0DN77 364 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 OPN1MW3P0DN78 364 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 MC5RP33032 325 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 RAB31Q13636 194 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 TGIF2LXQ8IUE1 241 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 SSMEM1Q8WWF3 244 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 CTDSP1Q9GZU7 261 aa7.33□□□□□ -1.24
TDP1-202ENST00000393452 NAV3Q8IVL0 2385 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 C11orf94C9JXX5 98 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 LYNX1G3V0Z9 82 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 CXorf1O96002 111 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 IGLV1-47P01700 117 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 IGHV2-5P01817 119 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 ARL14EPLP0DKL9 152 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 LYNX1P0DP58 116 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 NPPCP23582 126 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 SNRPEP62304 92 aaKnown RBP7.32□□□□□ -1.24
TDP1-202ENST00000393452 SPNS3Q6ZMD2 512 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 OR10W1Q8NGF6 305 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 C8orf46Q8TAG6 207 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 ABHD5Q8WTS1 349 aa7.32□□□□□ -1.24
TDP1-202ENST00000393452 RPUSD4Q96CM3 377 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms