RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 GRIFINA4D1Z8 144 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 LHBP01229 141 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 IGHV3-13P01766 116 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.09
COL17A1-203ENST00000393211 BRS3P32247 399 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 IER3P46695 156 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 PRCDQ00LT1 54 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 TIGITQ495A1 244 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 KRTCAP3Q53RY4 240 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 C2orf83Q53S99 150 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 RASL11AQ6T310 242 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 VKORC1L1Q8N0U8 176 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 SIGLECL1Q8N7X8 197 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 OR2Z1Q8NG97 314 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 OR4B1Q8NGF8 309 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 FAM222BQ8WU58 562 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 WFIKKN1Q96NZ8 548 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 HSPB9Q9BQS6 159 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 VAMP8Q9BV40 100 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 MRPL32Q9BYC8 188 aaKnown RBP8.21□□□□□ -1.09
COL17A1-203ENST00000393211 LINC00574Q9H8X3 128 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 IDI2-AS1Q9NZ38 188 aa8.21□□□□□ -1.09
COL17A1-203ENST00000393211 DOCK7Q96N67 2140 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 KBTBD11-OT1A0A1B0GTJ5 212 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 A0A1B0GUS0 222 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 LNP1A1A4G5 178 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 AHRRA9YTQ3 701 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 SNURFLB1AK76 121 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 SLC17A3O00476 420 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 GPX1P07203 203 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 IGFBP2P18065 325 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 MRPS11P82912 194 aaKnown RBP8.21□□□□□ -1.1
COL17A1-203ENST00000393211 C17orf58Q2M2W7 97 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 CT45A1Q5HYN5 189 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 SPATA31B1PQ5VZV4 182 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 ZNF705AQ6ZN79 300 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-203ENST00000393211 LRP11Q86VZ4 500 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 DEFB123Q8N688 67 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 CT45A3Q8NHU0 189 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 NABP2Q9BQ15 211 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 LRFN3Q9BTN0 628 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 SAMD10Q9BYL1 202 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 PLEKHA3Q9HB20 300 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 ZNF71Q9NQZ8 489 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-203ENST00000393211 PPP1R14DQ9NXH3 145 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 DKK4Q9UBT3 224 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 OR51B2Q9Y5P1 312 aa8.21□□□□□ -1.1
COL17A1-203ENST00000393211 DIDO1Q9BTC0 2240 aaKnown RBP8.21□□□□□ -1.1
COL17A1-203ENST00000393211 WDR87Q6ZQQ6 2873 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 UPK2O00526 184 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 TM4SF5O14894 197 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 FOXH1O75593 365 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 CGAP01215 116 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 SAA2P0DJI9 122 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-203ENST00000393211 GATA4P43694 442 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 PSG5Q15238 335 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 LPAL2Q16609 132 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 CENPWQ5EE01 88 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 VWA1Q6PCB0 445 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 IGFL2Q6UWQ7 119 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 MIR17HGQ75NE6 70 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 BHLHA15Q7RTS1 189 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-203ENST00000393211 C9orf106Q8NAJ2 232 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 ZNF439Q8NDP4 499 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 OR1L8Q8NGR8 309 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 OR5B3Q8NH48 314 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 CACNG8Q8WXS5 425 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 TMEM68Q96MH6 324 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 COMMD5Q9GZQ3 224 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 FAM234AQ9H0X4 552 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 FZR1Q9UM11 496 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 PROCRQ9UNN8 238 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 SLC25A15Q9Y619 301 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 MED13Q9UHV7 2174 aa8.2□□□□□ -1.1
COL17A1-203ENST00000393211 TET2Q6N021 2002 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-203ENST00000393211 SMIM27A0A1W2PRY6 76 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 INS-IGF2F8WCM5 200 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 J3QR06 171 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 AMY1AP04745 511 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 HNF1AP20823 631 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 PPOXP50336 477 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 HOXA4Q00056 320 aaPredicted RBP8.19□□□□□ -1.1
COL17A1-203ENST00000393211 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 TMEM136Q6ZRR5 245 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 OR8I2Q8N0Y5 310 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 WIPF2Q8TF74 440 aaPredicted RBP8.19□□□□□ -1.1
COL17A1-203ENST00000393211 KCNS1Q96KK3 526 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 GNB4Q9HAV0 340 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 BET1LQ9NYM9 111 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 NAT8BQ9UHF3 227 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 VCANP13611 3396 aa8.19□□□□□ -1.1
COL17A1-203ENST00000393211 TRAV17A0A0B4J275 112 aa8.18□□□□□ -1.1
COL17A1-203ENST00000393211 C8orf88P0DMB2 117 aa8.18□□□□□ -1.1
COL17A1-203ENST00000393211 CRYBB3P26998 211 aa8.18□□□□□ -1.1
COL17A1-203ENST00000393211 GLRXP35754 106 aa8.18□□□□□ -1.1
COL17A1-203ENST00000393211 COMPP49747 757 aaPredicted RBP8.18□□□□□ -1.1
COL17A1-203ENST00000393211 HES3Q5TGS1 186 aa8.18□□□□□ -1.1
COL17A1-203ENST00000393211 C19orf35Q6ZS72 473 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms