RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 TMEM167AQ8TBQ9 72 aa11.62□□□□□ -0.55
MKS1-203ENST00000393120 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
MKS1-203ENST00000393120 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
MKS1-203ENST00000393120 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
MKS1-203ENST00000393120 NDUFA4L2Q9NRX3 87 aa11.62□□□□□ -0.55
MKS1-203ENST00000393120 PAGE4O60829 102 aa11.61□□□□□ -0.55
MKS1-203ENST00000393120 STAG3L2P0CL84 134 aa11.61□□□□□ -0.55
MKS1-203ENST00000393120 STAG3L3P0CL85 134 aa11.61□□□□□ -0.55
MKS1-203ENST00000393120 HINT2Q9BX68 163 aa11.61□□□□□ -0.55
MKS1-203ENST00000393120 TMEM133Q9H2Q1 129 aa11.61□□□□□ -0.55
MKS1-203ENST00000393120 WASHC3Q9Y3C0 194 aa11.61□□□□□ -0.55
MKS1-203ENST00000393120 C5orf52A6NGY3 159 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 CLDN34H7C241 214 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PDE6DO43924 150 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 IL3RAP26951 378 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
MKS1-203ENST00000393120 B2MP61769 119 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 RPL8P62917 257 aaKnown RBP11.6□□□□□ -0.55
MKS1-203ENST00000393120 PRR20EP86478 221 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PRR20CP86479 221 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PRR20DP86480 221 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PRR20BP86481 221 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PRR20AP86496 221 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 ZNF841Q6ZN19 808 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 TMEM144Q7Z5S9 345 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 OR4F5Q8NH21 305 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 Q8WTZ3 238 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 GATAD1Q8WUU5 269 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 OR4F4Q96R69 305 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 TET2Q6N021 2002 aaPredicted RBP11.6□□□□□ -0.55
MKS1-203ENST00000393120 POLEQ07864 2286 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 CXorf1O96002 111 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 RBP4P02753 201 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 RNASE2P10153 161 aaKnown RBP11.6□□□□□ -0.55
MKS1-203ENST00000393120 COL8A2P25067 703 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 LINC00518Q8N0U6 118 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PARLQ9H300 379 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PATZ1Q9HBE1 687 aaKnown RBP11.6□□□□□ -0.55
MKS1-203ENST00000393120 DMXL2Q8TDJ6 3036 aa11.6□□□□□ -0.55
MKS1-203ENST00000393120 PIEZO2Q9H5I5 2752 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 C11orf94C9JXX5 98 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 IGLV2-23P01705 113 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 DEFA4P12838 97 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 LGALS7P47929 136 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 REG1BP48304 166 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 TGIF2LXQ8IUE1 241 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 STPG3Q8N7X2 389 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 CACNG8Q8WXS5 425 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 PCNX1Q96RV3 2341 aa11.59□□□□□ -0.55
MKS1-203ENST00000393120 A0A1W2PN81 502 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 VENTXO95231 258 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 S100A6P06703 90 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 CHRNA7P36544 502 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 GPX4P36969 197 aaPredicted RBP11.58□□□□□ -0.55
MKS1-203ENST00000393120 RHOBP62745 196 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 ERHP84090 104 aaKnown RBP11.58□□□□□ -0.55
MKS1-203ENST00000393120 DIAPH2-AS1Q14236 149 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 IQCF2Q8IXL9 164 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 C8orf46Q8TAG6 207 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 SSMEM1Q8WWF3 244 aa11.58□□□□□ -0.55
MKS1-203ENST00000393120 ATMQ13315 3056 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 CEP295Q9C0D2 2601 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 F6UZH7 168 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 OPN1MWP04001 364 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 CXCL1P09341 107 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 LINC00869P0C866 280 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 OPN1MW2P0DN77 364 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 OPN1MW3P0DN78 364 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 PRRX1P54821 245 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 SNRPEP62304 92 aaKnown RBP11.58□□□□□ -0.56
MKS1-203ENST00000393120 CDSNQ15517 529 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 ZNF343Q6P1L6 599 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 SPNS3Q6ZMD2 512 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 ABHD5Q8WTS1 349 aa11.58□□□□□ -0.56
MKS1-203ENST00000393120 RPUSD4Q96CM3 377 aaKnown RBP11.58□□□□□ -0.56
MKS1-203ENST00000393120 YLPM1P49750 1951 aaKnown RBP11.57□□□□□ -0.56
MKS1-203ENST00000393120 ARFGEF3Q5TH69 2177 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 UBE2CO00762 179 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 IGLV1-47P01700 117 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 IGHV2-5P01817 119 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 IGFBP2P18065 325 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 RPS10P46783 165 aaKnown RBP11.57□□□□□ -0.56
MKS1-203ENST00000393120 RPL23P62829 140 aaKnown RBP11.57□□□□□ -0.56
MKS1-203ENST00000393120 ZNF674Q2M3X9 581 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 PNKDQ8N490 385 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 SLC35E1Q96K37 410 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
MKS1-203ENST00000393120 METTL1Q9UBP6 276 aaKnown RBP11.57□□□□□ -0.56
MKS1-203ENST00000393120 TLN1Q9Y490 2541 aaKnown RBP11.57□□□□□ -0.56
MKS1-203ENST00000393120 TRBV24-1A0A075B6N3 115 aa11.56□□□□□ -0.56
MKS1-203ENST00000393120 DLL1O00548 723 aa11.56□□□□□ -0.56
MKS1-203ENST00000393120 TGOLN2O43493 480 aa11.56□□□□□ -0.56
MKS1-203ENST00000393120 CLN5O75503 358 aa11.56□□□□□ -0.56
MKS1-203ENST00000393120 SFTPCP11686 197 aa11.56□□□□□ -0.56
MKS1-203ENST00000393120 NPPCP23582 126 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms