RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 THNSL2Q86YJ6 484 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 EIF5A2Q9GZV4 153 aaKnown RBP12.12□□□□□ -0.47
MKS1-202ENST00000393119 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
MKS1-202ENST00000393119 WNK2Q9Y3S1 2297 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 ENSAO43768 121 aaKnown RBP12.11□□□□□ -0.47
MKS1-202ENST00000393119 IFNA10P01566 189 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 EFNA4P52798 201 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 OR2G3Q8NGZ4 309 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 ATP5SQ99766 215 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 IGLV1-47P01700 117 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 ZNF616Q08AN1 781 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 ELOBQ15370 118 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
MKS1-202ENST00000393119 C10orf55Q5SWW7 151 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 SPNS3Q6ZMD2 512 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST3H2BBQ8N257 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 LY6G5BQ8NDX9 201 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 PBDC1Q9BVG4 233 aa12.11□□□□□ -0.47
MKS1-202ENST00000393119 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 A0A087X0M5 115 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 UBE2L5PA0A1B0GUS4 154 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 A0A1B0GX30 115 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 C15orf62A8K5M9 175 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 S100A2P29034 98 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 TAS2R60P59551 318 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 LHFPL4Q7Z7J7 247 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 TGIF2LXQ8IUE1 241 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 OR10W1Q8NGF6 305 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 HARBI1Q96MB7 349 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 TCF19Q9Y242 345 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 FAM90A26D6RGX4 464 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 OVOL3O00110 214 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 CXCL1P09341 107 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 RPS10P46783 165 aaKnown RBP12.1□□□□□ -0.47
MKS1-202ENST00000393119 CAMLGP49069 296 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 BAXQ07812 192 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 SLC38A11Q08AI6 406 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 OR4P4Q8NGL7 312 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 ZNF596Q8TC21 504 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 Q8WTZ3 238 aa12.1□□□□□ -0.47
MKS1-202ENST00000393119 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 PRH1P02810 166 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 KIR2DS2P43631 304 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 VDAC2P45880 294 aaPredicted RBP12.09□□□□□ -0.47
MKS1-202ENST00000393119 NDUFA6P56556 154 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 RTL8BQ17RB0 113 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 HLA-DRB5Q30154 266 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 C2orf88Q9BSF0 95 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
MKS1-202ENST00000393119 HILPDAQ9Y5L2 63 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 TENM4Q6N022 2769 aa12.09□□□□□ -0.47
MKS1-202ENST00000393119 ELOA3CA0A087WX78 387 aaPredicted RBP12.08□□□□□ -0.47
MKS1-202ENST00000393119 BUB1B-PAK6H3BSN5 160 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 LIPFP07098 398 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 APELAP0DMC3 54 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 OR13C7P0DN81 318 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 DEFA4P12838 97 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 PKIAP61925 76 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 CCL20P78556 96 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 ZNF266Q14584 549 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 HCP5Q6MZN7 132 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 SLC25A24Q6NUK1 477 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 LINC00311Q8N616 119 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 OR10D4PQ8NGN7 298 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 LHX4Q969G2 390 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 CLEC7AQ9BXN2 247 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 OR51B2Q9Y5P1 312 aa12.08□□□□□ -0.47
MKS1-202ENST00000393119 PIGBOS1A0A0B4J2F0 54 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 PHOX2AO14813 284 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 FSTL3O95633 263 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 DDTP30046 118 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 GAMTQ14353 236 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 KHDC3LQ587J8 217 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 SPSB3Q6PJ21 355 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 MOB3BQ86TA1 216 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 C8orf46Q8TAG6 207 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 TMEM186Q96B77 213 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 FLYWCH2Q96CP2 140 aaKnown RBP12.08□□□□□ -0.48
MKS1-202ENST00000393119 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
MKS1-202ENST00000393119 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms