RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 RNASE3P12724 160 aaKnown RBP0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 CAV1Q03135 178 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 ZNF846Q147U1 533 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 RSU1Q15404 277 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 TEX36Q5VZQ5 186 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 GLT8D1Q68CQ7 371 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 GID4Q8IVV7 300 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 C10orf67Q8IYJ2 551 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 FAM96AQ9H5X1 160 aa0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 IMP3Q9NV31 184 aaKnown RBP0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 ZFHX2Q9C0A1 2572 aaPredicted RBP0.51□□□□□ -2.33
RNU6-550P-201ENST00000391057 TECTAO75443 2155 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 EIF4G1Q04637 1599 aaKnown RBP0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 FABP5P3A8MUU1 101 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 RPS4Y1P22090 263 aaKnown RBP0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 CD151P48509 253 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 SUPT4H1P63272 117 aaKnown RBP0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 DMTNQ08495 405 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 AAED1Q7RTV5 226 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 LINC00471Q8N535 108 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 WFDC11Q8NEX6 87 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 OR4C6Q8NH72 309 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 C11orf40Q8WZ69 217 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 AQP3Q92482 292 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 DIRAS2Q96HU8 199 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 UPF3BQ9BZI7 483 aaKnown RBP0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 IL36BQ9NZH7 164 aa0.5□□□□□ -2.33
RNU6-550P-201ENST00000391057 ROS1P08922 2347 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 POLEQ07864 2286 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 FBN2P35556 2912 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 TTC21AQ8NDW8 1320 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 FUOMA2VDF0 154 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 APOEP02649 317 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 PRM2P04554 102 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 KRT7P08729 469 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 RPL12P30050 165 aaKnown RBP0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 MAP2K4P45985 399 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 ZNF80P51504 273 aaPredicted RBP0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 UBE2IP63279 158 aaKnown RBP0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 MED21Q13503 144 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 IBA57Q5T440 356 aaKnown RBP0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 C1orf195Q5TG92 126 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 ZNF550Q7Z398 422 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 FAM9CQ8IZT9 166 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 TMEM106AQ96A25 262 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 HDHD2Q9H0R4 259 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 EFCAB1Q9HAE3 211 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 NOTCH1P46531 2555 aa0.49□□□□□ -2.33
RNU6-550P-201ENST00000391057 A0A087WX48 190 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 TRBV6-7A0A0A0MS04 114 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 OR5F1O95221 314 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 FAM228BP0C875 321 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 C8orf88P0DMB2 117 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 BLVRAP53004 296 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 MAP3K7CLP57077 242 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 MLLT11Q13015 90 aaPredicted RBP0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 STX5Q13190 355 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 TMED1Q13445 227 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 LCN15Q6UWW0 184 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 GPR32P1Q8NGA4 272 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 PIGXQ8TBF5 258 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 CNBD2Q96M20 576 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 C3orf18Q9UK00 162 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 BRWD1Q9NSI6 2320 aa0.48□□□□□ -2.33
RNU6-550P-201ENST00000391057 ABCC11Q96J66 1382 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 TRBV20OR9-2A0A075B6H5 130 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 EVPLLA8MZ36 301 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 M0QX08 132 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 CLPSP04118 112 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 UCHL3P15374 230 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 MYL12AP19105 171 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 MARCKSL1P49006 195 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 CCL20P78556 96 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 CLVS2Q5SYC1 327 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 SYPL2Q5VXT5 272 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 LRRN1Q6UXK5 716 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 DEFB125Q8N687 156 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 RASSF5Q8WWW0 418 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 FGFR1OP2Q9NVK5 253 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 CACNA1BQ00975 2339 aa0.47□□□□□ -2.33
RNU6-550P-201ENST00000391057 LOC110117498A0A087WWA1 95 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 CXCR6O00574 342 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 BRS3P32247 399 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 IFITM2Q01629 132 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 KISS1Q15726 138 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 GRK1Q15835 563 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 COQ5Q5HYK3 327 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 LINC00526Q96FQ7 95 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 DRC3Q9H069 523 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 CISHQ9NSE2 258 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 LAMB4A4D0S4 1761 aa0.46□□□□□ -2.34
RNU6-550P-201ENST00000391057 NCOA6Q14686 2063 aaPredicted RBP0.45□□□□□ -2.34
RNU6-550P-201ENST00000391057 ALPK2Q86TB3 2170 aa0.45□□□□□ -2.34
RNU6-550P-201ENST00000391057 A0A0A6YYH2 397 aa0.45□□□□□ -2.34
RNU6-550P-201ENST00000391057 A0A0J9YY10 115 aa0.45□□□□□ -2.34
RNU6-550P-201ENST00000391057 A0A1B0GV50 99 aa0.45□□□□□ -2.34
RNU6-550P-201ENST00000391057 A0A1B0GX78 115 aa0.45□□□□□ -2.34
RNU6-550P-201ENST00000391057 A6NJ64 397 aa0.45□□□□□ -2.34
RNU6-550P-201ENST00000391057 M0QZ92 97 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms