RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 INIPQ9NRY2 104 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 FAM49BQ9NUQ9 324 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC39A1Q9NY26 324 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CALYQ9NYX4 217 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 IDI2-AS1Q9NZ38 188 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 EIF3LQ9Y262 564 aaKnown RBP-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 ALG5Q9Y673 324 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 CPDO75976 1380 aa-2.01□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A0B4J2C4 111 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 IGHV1-58A0A0C4DH39 117 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A0X1KG70 313 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 C2orf74A8MZ97 194 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 H3BRM9 83 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCER2I3L3R5 266 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 M0R2P5 195 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 PLPP1O14494 284 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 ARPC5O15511 151 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TPD52L2O43399 206 aaKnown RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 PRKYO43930 277 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 SULT1C4O75897 302 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 IGHV3-30P01768 117 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 METTL15P1P0C7V9 234 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 IGHV3-30-5P0DP03 117 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 PSMA2P25787 234 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CNTFP26441 200 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TEAD1P28347 426 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 LAP3P28838 519 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 ADORA1P30542 326 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CASP14P31944 242 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 PFN2P35080 140 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 ARL3P36405 182 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CEACAM3P40198 252 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 RPS27P42677 84 aaKnown RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 FRKP42685 505 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 ACADSBP45954 432 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CLDN12P56749 244 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 MRPS22P82650 360 aaKnown RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 MPP1Q00013 466 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR4D1Q15615 310 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TBC1D28Q2M2D7 210 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CARD16Q5EG05 197 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TEX30Q5JUR7 227 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR2G6Q5TZ20 316 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 H2AFVQ71UI9 128 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 RUFY3Q7L099 469 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 HEATR4Q86WZ0 1026 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 NDUFA11Q86Y39 141 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 MFSD9Q8NBP5 474 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TSPAN14Q8NG11 270 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR10W1Q8NGF6 305 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR8J3Q8NGG0 315 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR1L8Q8NGR8 309 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5H2Q8NGV7 314 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 HAVCR2Q8TDQ0 301 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CYGBQ8WWM9 190 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 FGF14Q92915 247 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 SYAP1Q96A49 352 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC127Q96BQ5 260 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 LRRC45Q96CN5 670 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 MS4A14Q96JA4 679 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 GPR82Q96P67 336 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC38A2Q96QD8 506 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 LYSMD1Q96S90 227 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 GPX7Q96SL4 187 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC39A3Q9BRY0 314 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM208Q9BTX3 173 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 C12orf4Q9NQ89 552 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 DYRK4Q9NR20 520 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 CCDC59Q9P031 241 aaKnown RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 STX18Q9P2W9 335 aaKnown RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 SLC22A13Q9Y226 551 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRAPPC1Q9Y5R8 145 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 SNX8Q9Y5X2 465 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TMEM2Q9UHN6 1383 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 MED23Q9ULK4 1368 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 NUP160Q12769 1436 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 UACAQ9BZF9 1416 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 POLA1P09884 1462 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 TOPAZ1Q8N9V7 1692 aa-2.02□□□□□ -2.73
RNU6-540P-201ENST00000384622 ANKRD26Q9UPS8 1709 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 TRAV6A0A075B6T7 132 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 DEFB131BA0A096LNP1 70 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 A0A1W2PQD3 144 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 H7C0C1 242 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 hCG_2039718K7EN88 272 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 M0R296 226 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 DDX39AO00148 427 aaKnown RBP-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 AGPAT2O15120 278 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 SPOPO43791 374 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 NUPR1O60356 82 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 HSF2BPO75031 334 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 RDH16O75452 317 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 TSPAN12O95859 305 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 TXNDC12O95881 172 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 HRASP01112 189 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 SERPINA7P05543 415 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 OR5H8P0DN80 308 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 IL12AP29459 219 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 CRYBB2P43320 205 aa-2.03□□□□□ -2.73
RNU6-540P-201ENST00000384622 VDAC2P45880 294 aaPredicted RBP-2.03□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms