RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 PGAM2P15259 253 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 PTBP1P26599 531 aaKnown RBP eCLIP8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 PSMB6P28072 239 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 PIGPP57054 158 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 ZNF79Q15937 498 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 SCGB2B2Q4G0G5 96 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 ACSM6Q6P461 480 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 SLC25A42Q86VD7 318 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 CADM3Q8N126 398 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 OR10W1Q8NGF6 305 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 OR13C8Q8NGS7 320 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 TERB2Q8NHR7 220 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 MARCH1Q8TCQ1 289 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 TRIM63Q969Q1 353 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 USMG5Q96IX5 58 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 TP53RKQ96S44 253 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 RANGRFQ9HD47 186 aaPredicted RBP8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 NSG2Q9Y328 171 aa8.84□□□□□ -0.99
APOBEC3F-202ENST00000381565 IGLV11-55A0A075B6I3 123 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 TEX50A0A1B0GTY4 177 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 C15orf61A6NNL5 157 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 H0Y980 276 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 BMPR1BO00238 502 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 NDUFB8O95169 186 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 AKAIN1P0CW23 69 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 ERVK-16P61578 105 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 WT1-ASQ06250 92 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 MEF2DQ14814 521 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 C15orf32Q32M92 178 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 NECAP1Q8NC96 275 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 CCDC140Q96MF4 163 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 PRR25Q96S07 402 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 QTRT1Q9BXR0 403 aaKnown RBP8.83□□□□□ -1
APOBEC3F-202ENST00000381565 COMMD5Q9GZQ3 224 aa8.83□□□□□ -1
APOBEC3F-202ENST00000381565 PEF1Q9UBV8 284 aaKnown RBP8.83□□□□□ -1
APOBEC3F-202ENST00000381565 DNAH7Q8WXX0 4024 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.82□□□□□ -1
APOBEC3F-202ENST00000381565 DPPA5A6NC42 116 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 FABP12A6NFH5 140 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 SAP30O75446 220 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 IGKV1-5P01602 117 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 CTSDP07339 412 aaPredicted RBP8.82□□□□□ -1
APOBEC3F-202ENST00000381565 P0C879 139 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 ZP3P21754 424 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 S100GP29377 79 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 INSL3P51460 131 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 ATP5G2Q06055 141 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
APOBEC3F-202ENST00000381565 IL34Q6ZMJ4 242 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 CCDC190Q86UF4 302 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 HAPLN4Q86UW8 402 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 SRSF8Q9BRL6 282 aaKnown RBP8.82□□□□□ -1
APOBEC3F-202ENST00000381565 RTBDNQ9BSG5 229 aaPredicted RBP8.82□□□□□ -1
APOBEC3F-202ENST00000381565 NDUFA4L2Q9NRX3 87 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 TMEM14BQ9NUH8 114 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 SLC2A8Q9NY64 477 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 FBXL7Q9UJT9 491 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 S4R3C0 116 aa8.82□□□□□ -1
APOBEC3F-202ENST00000381565 MFSD2BA6NFX1 497 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 DISC1C4P0D8 188 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 PPP5D1E7EU14 171 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 IGHV3-23P01764 117 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 TRAPPC2P0DI81 140 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 TRAPPC2BP0DI82 140 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 ECI1P42126 302 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 MFAP2P55001 183 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 IZUMO4Q1ZYL8 232 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 ZNF429Q86V71 674 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 GDPD1Q8N9F7 314 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 OR51S1Q8NGJ8 323 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 OR1L8Q8NGR8 309 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 C5orf66Q9H5L9 145 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 OR51B2Q9Y5P1 312 aa8.81□□□□□ -1
APOBEC3F-202ENST00000381565 HUWE1Q7Z6Z7 4374 aaKnown RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 STAB2Q8WWQ8 2551 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 A0A0G2JRQ6 117 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 C3orf85A0A1B0GTC6 90 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 SERPINE2P07093 398 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 UCP1P25874 307 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 SYNJ2BPP57105 145 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 KLF9Q13886 244 aaPredicted RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 SURF2Q15527 256 aaPredicted RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 RPEL1Q2QD12 228 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 SP6Q3SY56 376 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 THOC7Q6I9Y2 204 aaKnown RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 CCDC71LQ8N9Z2 235 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 OR9G4Q8NGQ1 327 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 LHFPL5Q8TAF8 219 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 ZFAND1Q8TCF1 268 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 LSM10Q969L4 123 aaKnown RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 TMEM230Q96A57 120 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 THAP7Q9BT49 309 aaPredicted RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 COPZ2Q9P299 210 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 PRNDQ9UKY0 176 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 GPR132Q9UNW8 380 aa8.8□□□□□ -1
APOBEC3F-202ENST00000381565 ZNF256Q9Y2P7 627 aaPredicted RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 LSM4Q9Y4Z0 139 aaKnown RBP8.8□□□□□ -1
APOBEC3F-202ENST00000381565 SNAPC5O75971 98 aa8.79□□□□□ -1
APOBEC3F-202ENST00000381565 DHFRP00374 187 aa8.79□□□□□ -1
APOBEC3F-202ENST00000381565 IGLV1-51P01701 117 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms