RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ERVK-16P61578 105 aa9.81□□□□□ -0.84
RPAIN-202ENST00000381208 CLEC19AQ6UXS0 136 aa9.81□□□□□ -0.84
RPAIN-202ENST00000381208 LINC00322Q6ZN03 302 aaPredicted RBP9.81□□□□□ -0.84
RPAIN-202ENST00000381208 CADM3Q8N126 398 aa9.81□□□□□ -0.84
RPAIN-202ENST00000381208 A0A1B0GW64 132 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 SULT1C2O00338 296 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 UPK2O00526 184 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 AREGP15514 252 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 CBLN1P23435 193 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 TAS2R46P59540 309 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 FXYD4P59646 89 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 OR2B8PP59922 312 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 GUCA2BQ16661 112 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 UBE2NLQ5JXB2 153 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 AADACL3Q5VUY0 350 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 ZNF57Q68EA5 555 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-202ENST00000381208 DHRS11Q6UWP2 260 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 ADAMTSL5Q6ZMM2 481 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 CMTM1Q8IZ96 169 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 CCDC140Q96MF4 163 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 ATP6V0BQ99437 205 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 QTRT1Q9BXR0 403 aaKnown RBP9.8□□□□□ -0.84
RPAIN-202ENST00000381208 PLEKHA3Q9HB20 300 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 EHFQ9NZC4 300 aa9.8□□□□□ -0.84
RPAIN-202ENST00000381208 TRAV25A0A0B4J276 109 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 LCE6AA0A183 80 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 ZNF320A2RRD8 509 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 OR11H12B2RN74 326 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 CLEC3BP05452 202 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 PTBP1P26599 531 aaKnown RBP eCLIP9.79□□□□□ -0.84
RPAIN-202ENST00000381208 S100GP29377 79 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 ELLP55199 621 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-202ENST00000381208 ZNF818PQ6ZRF7 136 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 TMEM17Q86X19 198 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 DMBX1Q8NFW5 382 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 MCFD2Q8NI22 146 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 VN1R17PQ8TDU5 208 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 SLIRPQ9GZT3 109 aaKnown RBP9.79□□□□□ -0.84
RPAIN-202ENST00000381208 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
RPAIN-202ENST00000381208 IGLC7A0M8Q6 106 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 TMEM213A2RRL7 107 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 HLA-AP01891 365 aaKnown RBP9.78□□□□□ -0.84
RPAIN-202ENST00000381208 CD7P09564 240 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 PTHLHP12272 177 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 MYOD1P15172 320 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 F2RP25116 425 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 GNRHRP30968 328 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 S100A5P33763 92 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
RPAIN-202ENST00000381208 TMEM69Q5SWH9 247 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 PLET1Q6UQ28 207 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 OR1L6Q8NGR2 347 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 OR1L8Q8NGR8 309 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 OR5H2Q8NGV7 314 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 OR51H1Q8NH63 302 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 MOB3AQ96BX8 217 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 GPHA2Q96T91 129 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 NXF2Q9GZY0 626 aaKnown RBP9.78□□□□□ -0.84
RPAIN-202ENST00000381208 HIPK2Q9H2X6 1198 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 FKBP11Q9NYL4 201 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 MRPL27Q9P0M9 148 aaKnown RBP9.78□□□□□ -0.84
RPAIN-202ENST00000381208 ANAPC10Q9UM13 185 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 UFC1Q9Y3C8 167 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 TENM2Q9NT68 2774 aa9.78□□□□□ -0.84
RPAIN-202ENST00000381208 CGB1A6NKQ9 187 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 MARCH11A6NNE9 402 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 TRAPPC2P0DI81 140 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 TRAPPC2BP0DI82 140 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 NAT1P18440 290 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 PRSS3P35030 304 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 ZFAND6Q6FIF0 208 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 LPCAT3Q6P1A2 487 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 C19orf35Q6ZS72 473 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 GDPD1Q8N9F7 314 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 UXS1Q8NBZ7 420 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 OR6F1Q8NGZ6 308 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 ZNF502Q8TBZ5 544 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 SLC25A46Q96AG3 418 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 ZNF2Q9BSG1 426 aaPredicted RBP9.77□□□□□ -0.84
RPAIN-202ENST00000381208 KRTAP9-9Q9BYP9 154 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 KRTAP9-4Q9BYQ2 154 aa9.77□□□□□ -0.84
RPAIN-202ENST00000381208 FAM212BQ9NTI7 297 aaPredicted RBP9.77□□□□□ -0.84
RPAIN-202ENST00000381208 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
RPAIN-202ENST00000381208 MFSD2BA6NFX1 497 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 SNAPC5O75971 98 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 S1PR2O95136 353 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 IGHV3-23P01764 117 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 REG1AP05451 166 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 C8orf88P0DMB2 117 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 GPR183P32249 361 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 TAS2R20P59543 309 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 SPSB3Q6PJ21 355 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 DEFB125Q8N687 156 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 SAMD12Q8N8I0 201 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 OR52B4Q8NGK2 314 aa9.76□□□□□ -0.85
RPAIN-202ENST00000381208 LSM10Q969L4 123 aaKnown RBP9.76□□□□□ -0.85
RPAIN-202ENST00000381208 WDR89Q96FK6 387 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-202ENST00000381208 CMTM3Q96MX0 182 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms