RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 BTN1A1Q13410 526 aa16■□□□□ 0.15
PDLIM5-205ENST00000380180 RPP25LQ8N5L8 163 aaKnown RBP16■□□□□ 0.15
PDLIM5-205ENST00000380180 MBD3L1Q8WWY6 194 aa16■□□□□ 0.15
PDLIM5-205ENST00000380180 IGFBPL1Q8WX77 278 aa16■□□□□ 0.15
PDLIM5-205ENST00000380180 BPESC1Q9GZL8 116 aa16■□□□□ 0.15
PDLIM5-205ENST00000380180 NAV3Q8IVL0 2385 aa16■□□□□ 0.15
PDLIM5-205ENST00000380180 ZNF462Q96JM2 2506 aa16■□□□□ 0.15
PDLIM5-205ENST00000380180 RBFOX3A6NFN3 312 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 C17orf112F2Z3M2 114 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 IGHV4-39P01824 125 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 KLRD1Q13241 179 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 FFAR4Q5NUL3 377 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 HCP5Q6MZN7 132 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 LCN15Q6UWW0 184 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 SVBPQ8N300 66 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 TPSG1Q9NRR2 321 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 ASH1LQ9NR48 2969 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 HTR1DP28221 377 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 ARSJQ5FYB0 599 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 C1orf122Q6ZSJ8 110 aa15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 KLF2Q9Y5W3 355 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-205ENST00000380180 CGB1A6NKQ9 187 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 CNTFRP26992 372 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 LCN2P80188 198 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 HAGHQ16775 308 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 MRGPRG-AS1Q2M3A8 158 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 BSXQ3C1V8 233 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 NPVFQ9HCQ7 196 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 DPM3Q9P2X0 92 aa15.98■□□□□ 0.15
PDLIM5-205ENST00000380180 EPG5Q9HCE0 2579 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 A0A1W2PPI3 338 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 MPDU1O75352 247 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 MBP02144 154 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 C10orf55Q5SWW7 151 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 TPTE2P1Q5T6R2 138 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 TEX45Q8NA69 505 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 OR10G4Q8NGN3 311 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 OR10G9Q8NGN4 311 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 OR10G7Q8NGN6 311 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 NKX6-2Q9C056 277 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 EIF3GO75821 320 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 RNASE2P10153 161 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 FGF8P55075 233 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 ATP5IP56385 69 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 LMO4P61968 165 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 PAX2Q02962 417 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 C2orf83Q53S99 150 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 ZNF787Q6DD87 383 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 VMO1Q7Z5L0 202 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 KIR3DL3Q8N743 410 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 CLDND2Q8NHS1 167 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 C1orf159Q96HA4 380 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 CCL19Q99731 98 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 SPOCK3Q9BQ16 436 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 SLC39A9Q9NUM3 307 aa15.97■□□□□ 0.15
PDLIM5-205ENST00000380180 ODF3BA8MYP8 253 aa15.96■□□□□ 0.15
PDLIM5-205ENST00000380180 CRYGBP07316 175 aa15.96■□□□□ 0.15
PDLIM5-205ENST00000380180 ERHP84090 104 aaKnown RBP15.96■□□□□ 0.15
PDLIM5-205ENST00000380180 LHFPL4Q7Z7J7 247 aa15.96■□□□□ 0.15
PDLIM5-205ENST00000380180 MGST2Q99735 147 aa15.96■□□□□ 0.15
PDLIM5-205ENST00000380180 SMDT1Q9H4I9 107 aa15.96■□□□□ 0.15
PDLIM5-205ENST00000380180 HILPDAQ9Y5L2 63 aa15.96■□□□□ 0.15
PDLIM5-205ENST00000380180 INS-IGF2F8WCM5 200 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 PSG5Q15238 335 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 SLC35B3Q9H1N7 401 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 LSM4Q9Y4Z0 139 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 KPTNQ9Y664 436 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 A0A1W2PN81 502 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 A0A1W2PRD5 423 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 A0A1W2PRF3 423 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 A0A1W2PRM7 423 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 MAP1LC3B2A6NCE7 125 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 M6PRP20645 277 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 CHRNA7P36544 502 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 WT1-ASQ06250 92 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 MAP1LC3BQ9GZQ8 125 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 UNKLQ9H9P5 680 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 SIGLEC9Q9Y336 463 aa15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 UTP20O75691 2785 aaKnown RBP15.95■□□□□ 0.14
PDLIM5-205ENST00000380180 TIMM23O14925 209 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 CEACAM3P40198 252 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 PDLIM4P50479 330 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 SLC25A22Q9H936 323 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 HMGB3O15347 200 aaKnown RBP15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 OPRK1P41145 380 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 ICAM4Q14773 271 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 PRSS8Q16651 343 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 ZNF506Q5JVG8 444 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 TEPPQ6URK8 271 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 MMD2Q8IY49 270 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 GGTLC1Q9BX51 225 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 SIRPDQ9H106 197 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 GNG13Q9P2W3 67 aa15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 TMA7Q9Y2S6 64 aaKnown RBP15.94■□□□□ 0.14
PDLIM5-205ENST00000380180 SPG11Q96JI7 2443 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 IGHV2-70DA0A0C4DH43 119 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 CTXND1A0A1B0GTU2 59 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 FNDC10F2Z333 226 aa15.93■□□□□ 0.14
PDLIM5-205ENST00000380180 SNAPINO95295 136 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms