RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 HARBI1Q96MB7 349 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 SMDT1Q9H4I9 107 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 MMP24Q9Y5R2 645 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 C9JQL5 133 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 OR9G9P0C7N8 305 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 NQO2P16083 231 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 CNTFRP26992 372 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 RPS16P62249 146 aaKnown RBP11.31□□□□□ -0.6
TPM2-204ENST00000378300 FOXRED2Q8IWF2 684 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 OR4C13Q8NGP0 309 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 C22orf15Q8WYQ4 148 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
TPM2-204ENST00000378300 CACNG5Q9UF02 275 aa11.31□□□□□ -0.6
TPM2-204ENST00000378300 LSM5Q9Y4Y9 91 aaKnown RBP11.31□□□□□ -0.6
TPM2-204ENST00000378300 C5orf52A6NGY3 159 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
TPM2-204ENST00000378300 HNF4GQ14541 408 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 GUK1Q16774 197 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 OR4A47Q6IF82 309 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
TPM2-204ENST00000378300 OSR1Q8TAX0 266 aaPredicted RBP11.3□□□□□ -0.6
TPM2-204ENST00000378300 SMR3AQ99954 134 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 PBDC1Q9BVG4 233 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
TPM2-204ENST00000378300 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 EIF3GO75821 320 aaKnown RBP eCLIP11.29□□□□□ -0.6
TPM2-204ENST00000378300 FSHBP01225 129 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 SNRNP70P08621 437 aaKnown RBP11.29□□□□□ -0.6
TPM2-204ENST00000378300 SAA1P0DJI8 122 aaPredicted RBP11.29□□□□□ -0.6
TPM2-204ENST00000378300 CD1BP29016 333 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 PPT1P50897 306 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 AWAT1Q58HT5 328 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 CXorf66Q5JRM2 361 aaPredicted RBP11.29□□□□□ -0.6
TPM2-204ENST00000378300 CCDC144NLQ6NUI1 221 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 OR4D5Q8NGN0 318 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 C2CD4CQ8TF44 421 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 CLCC1Q96S66 551 aa11.29□□□□□ -0.6
TPM2-204ENST00000378300 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
TPM2-204ENST00000378300 A0A1B0GU03 582 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 MDFIC2A0A1B0GVS7 189 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 CYSRT1A8MQ03 144 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 AGPAT2O15120 278 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 PITX3O75364 302 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 SCGB1D2O95969 90 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 HRASP01112 189 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 CAMLGP49069 296 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 ERVK-16P61578 105 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 RPS10P5Q9NQ39 176 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 TPSG1Q9NRR2 321 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 SETXQ7Z333 2677 aaKnown RBP11.28□□□□□ -0.6
TPM2-204ENST00000378300 ST8SIA3O43173 380 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 CD5LO43866 347 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 S100A9P06702 114 aaKnown RBP11.28□□□□□ -0.6
TPM2-204ENST00000378300 S100A6P06703 90 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 MAS1LP35410 378 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 OR2B8PP59922 312 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 HES1Q14469 280 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 POU2AF1Q16633 256 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 EAF1Q96JC9 268 aaPredicted RBP11.28□□□□□ -0.6
TPM2-204ENST00000378300 SMIM3Q9BZL3 60 aa11.28□□□□□ -0.6
TPM2-204ENST00000378300 PIGBOS1A0A0B4J2F0 54 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 C7orf77A4D0Y5 90 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 FAM90A9PA6NNJ1 464 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 SLC25A17O43808 307 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 IL6RP08887 468 aaPredicted RBP11.27□□□□□ -0.61
TPM2-204ENST00000378300 MYOD1P15172 320 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 RELBQ01201 579 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 ZNF616Q08AN1 781 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 NANPQ8TBE9 248 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 SPIN2AQ99865 258 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 SPIN2BQ9BPZ2 258 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 MAGT1Q9H0U3 335 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.61
TPM2-204ENST00000378300 MOSP00540 346 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 SLC25A6P12236 298 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
TPM2-204ENST00000378300 MRGPRG-AS1Q2M3A8 158 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
TPM2-204ENST00000378300 MEGF9Q9H1U4 602 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 SONP18583 2426 aaKnown RBP11.26□□□□□ -0.61
TPM2-204ENST00000378300 TNCP24821 2201 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 TET2Q6N021 2002 aaPredicted RBP11.26□□□□□ -0.61
TPM2-204ENST00000378300 BTBD17A6NE02 478 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 UMAD1C9J7I0 102 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 RBMXL2O75526 392 aaKnown RBP11.26□□□□□ -0.61
TPM2-204ENST00000378300 KBTBD11O94819 623 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 RAB5AP20339 215 aa11.26□□□□□ -0.61
TPM2-204ENST00000378300 NKX2-1P43699 371 aaPredicted RBP11.26□□□□□ -0.61
TPM2-204ENST00000378300 LGALS7P47929 136 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms