RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ZXDCQ2QGD7 858 aaPredicted RBP11.94□□□□□ -0.5
TRIM13-202ENST00000378182 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 OR1P1Q8NH06 330 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 SPAG8Q99932 426 aaPredicted RBP11.94□□□□□ -0.5
TRIM13-202ENST00000378182 IGHV2OR16-5A0A0B4J2B6 119 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 IGHV3-53P01767 116 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 GLRXP35754 106 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 C12orf54Q6X4T0 127 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 PKIBQ9C010 78 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 CRIM1Q9NZV1 1036 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 SCN5AQ14524 2016 aa11.94□□□□□ -0.5
TRIM13-202ENST00000378182 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 CCL3L1P16619 93 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 LINC00299Q6ZSB3 139 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 COL25A1Q9BXS0 654 aaPredicted RBP11.93□□□□□ -0.5
TRIM13-202ENST00000378182 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 KCNE5Q9UJ90 142 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 KIR3DL3Q8N743 410 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 MAPK1IP1LQ8NDC0 245 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 MIXL1Q9H2W2 232 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 SIRT4Q9Y6E7 314 aaPredicted RBP11.93□□□□□ -0.5
TRIM13-202ENST00000378182 AHCTF1Q8WYP5 2266 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 COL11A2P13942 1736 aaPredicted RBP11.93□□□□□ -0.5
TRIM13-202ENST00000378182 TMEM54Q969K7 222 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 V9GYH0 126 aa11.93□□□□□ -0.5
TRIM13-202ENST00000378182 MARF1Q9Y4F3 1742 aaKnown RBP11.92□□□□□ -0.5
TRIM13-202ENST00000378182 CFDP00746 253 aaPredicted RBP11.92□□□□□ -0.5
TRIM13-202ENST00000378182 LEMD1Q68G75 181 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 PARP14Q460N5 1801 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 TGIF2-C20orf24A0A0A6YYL0 155 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 SEC11BP0C7V7 166 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 DOCK6Q96HP0 2047 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 MAP1BP46821 2468 aaKnown RBP11.92□□□□□ -0.5
TRIM13-202ENST00000378182 C7orf66A4D0T2 115 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
TRIM13-202ENST00000378182 ZNF79Q15937 498 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 TBR1Q16650 682 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 OR10J3Q5JRS4 329 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 GREB1Q4ZG55 1949 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 KLF4O43474 513 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 FBLN7Q53RD9 439 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 DTX2Q86UW9 622 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 CHCHD5Q9BSY4 110 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 COL18A1P39060 1754 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 LOC390937A0A1W2PQ73 354 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 SERF2P84101 59 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 CENPWQ5EE01 88 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 TMEM91Q6ZNR0 172 aa11.92□□□□□ -0.5
TRIM13-202ENST00000378182 DOCK7Q96N67 2140 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 IGFBP2P18065 325 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 TMEM252Q8N6L7 170 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 TNFSF18Q9UNG2 199 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 ADARB2-AS1A8MUL3 147 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 NPIPB8E9PQR5 432 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 NPIPB9F8W1W9 429 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 NPIPB7O75200 414 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 FAM206AQ9NX38 181 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 TRGC2P03986 189 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 ERGP11308 486 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 PPIFP30405 207 aaKnown RBP11.91□□□□□ -0.5
TRIM13-202ENST00000378182 PET117Q6UWS5 81 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 GDF15Q99988 308 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 RAMP1O60894 148 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 APOMO95445 188 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 EVI2AP22794 236 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 C10orf126Q8N4M7 172 aa11.91□□□□□ -0.5
TRIM13-202ENST00000378182 TRAV14DV4A0A0A6YYC5 116 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 CD8AP01732 235 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 KLRD1Q13241 179 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 NRIP2Q9BQI9 281 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 IFT22Q9H7X7 185 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 CGAP01215 116 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 SOD3P08294 240 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
TRIM13-202ENST00000378182 C4orf51C9J302 202 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 LEPP41159 167 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 FOXA3P55318 350 aaPredicted RBP11.9□□□□□ -0.5
TRIM13-202ENST00000378182 FAM166AQ6J272 317 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 MUC1P15941 1255 aaPredicted RBP11.9□□□□□ -0.5
TRIM13-202ENST00000378182 FAM209AQ5JX71 171 aa11.9□□□□□ -0.5
TRIM13-202ENST00000378182 CGB3P0DN86 165 aa11.9□□□□□ -0.51
TRIM13-202ENST00000378182 RAG2P55895 527 aa11.9□□□□□ -0.51
TRIM13-202ENST00000378182 RTN4RL2Q86UN3 420 aa11.9□□□□□ -0.51
TRIM13-202ENST00000378182 TRPM7Q96QT4 1865 aa11.9□□□□□ -0.51
TRIM13-202ENST00000378182 C17orf100A8MU93 164 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 PSMG4Q5JS54 123 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 SFTA2Q6UW10 78 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 UNQ6494/PRO21346Q6UXR6 183 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 HBBP68871 147 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 OR10S1Q8NGN2 331 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 IGKV1D-42A0A075B6H8 117 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.89□□□□□ -0.51
TRIM13-202ENST00000378182 MYOD1P15172 320 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 SAMD13Q5VXD3 122 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 BRD3OSQ6XYD6 125 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 VENTXO95231 258 aa11.89□□□□□ -0.51
TRIM13-202ENST00000378182 FOLR2P14207 255 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms