RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 HYPMO75409 117 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 WNT2P09544 360 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 CNN1P51911 297 aaKnown RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 DEFB113Q30KQ7 82 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 CLEC19AQ6UXS0 136 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 LHFPL4Q7Z7J7 247 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 PDPNQ86YL7 162 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 FAM89BQ8N5H3 189 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 SRSF12Q8WXF0 261 aaKnown RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 RSG1Q9BU20 258 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 SCO1O75880 301 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 MBPP02686 304 aaPredicted RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 LRRC75BQ2VPJ9 315 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 WDR86Q86TI4 376 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 NECAP1Q8NC96 275 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 TMEM204Q9BSN7 226 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 OR5AC2Q9NZP5 309 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 RNF24Q9Y225 148 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 KLF2Q9Y5W3 355 aaPredicted RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 IGLV3-9A0A075B6K5 115 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 SLC31A2O15432 143 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 TUSC1Q2TAM9 212 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 TMEM155Q4W5P6 130 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 C22orf34Q6ZV56 151 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 METTL26Q96S19 204 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 TRAF4Q9BUZ4 470 aaPredicted RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 HELZ2Q9BYK8 2649 aaKnown RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 IGHV4-61A0A0C4DH41 118 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 C7orf66A4D0T2 115 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 CA2P00918 260 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 HSPB1P04792 205 aaKnown RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 TAGLN2P37802 199 aaKnown RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 P2RY1P47900 373 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 MIDNQ504T8 468 aa6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 KLF17Q5JT82 389 aaPredicted RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 FAM53AQ6NSI3 398 aaPredicted RBP6.98□□□□□ -1.29
CRNKL1-202ENST00000377340 SERTM2A0A1B0GWG4 89 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 CLN5O75503 358 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 IL4P05112 153 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 PJVKQ0ZLH3 352 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 BTN1A1Q13410 526 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 MIC13Q5XKP0 118 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 ZNF680Q8NEM1 530 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 ATP5SQ99766 215 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 ALX4Q9H161 411 aaPredicted RBP6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 FOXA2Q9Y261 457 aaPredicted RBP6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 TCRBV4S1A1TA0A5B7 111 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 EFNB3Q15768 340 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 SPRNQ5BIV9 151 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 C16orf92Q96LL3 132 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 WNT10AQ9GZT5 417 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 VCANP13611 3396 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 UMAD1C9J7I0 102 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 CORTO00230 105 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 IGHV4-39P01824 125 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 CD74P04233 296 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 AGAP20933 346 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 PRTN3P24158 256 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 S100A12P80511 92 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 HLA-DRB5Q30154 266 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 OR1L6Q8NGR2 347 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 BSCL2Q96G97 398 aaPredicted RBP6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 NIT2Q9NQR4 276 aa6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 TECRQ9NZ01 308 aaKnown RBP6.97□□□□□ -1.29
CRNKL1-202ENST00000377340 SPINK4O60575 86 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 GALR1P47211 349 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 UCP3P55916 312 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 TMEM187Q14656 261 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 TM4SF20Q53R12 229 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 Q6P435 159 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 EEF1AKMT3Q96AZ1 226 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 HIGD1AQ9Y241 93 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 KPTNQ9Y664 436 aa6.96□□□□□ -1.29
CRNKL1-202ENST00000377340 DUXBA0A1W2PPF3 345 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 NPPCP23582 126 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 MPZP25189 248 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 LDLRAD3Q86YD5 345 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 KIR3DL3Q8N743 410 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 PLXNB1O43157 2135 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 IGHV1-3A0A0C4DH29 117 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 A0A0G2JLM5 398 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 F5H697 171 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 AP4M1O00189 453 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 OR5B3Q8NH48 314 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 IGFBPL1Q8WX77 278 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 C21orf62Q9NYP8 219 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 MAST4O15021 2626 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 MPTX1A8MV57 137 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 BMPR1BO00238 502 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 ANKRD17O75179 2603 aaKnown RBP6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 CD8AP01732 235 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 MT-ND4LP03901 98 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 ATP6V0CP27449 155 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 LAMTOR1Q6IAA8 161 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 PXMP4Q9Y6I8 212 aa6.96□□□□□ -1.3
CRNKL1-202ENST00000377340 H7BYZ3 331 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms