RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SSMEM1Q8WWF3 244 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 RAB1CQ92928 201 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 C12orf57Q99622 126 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 LSM4Q9Y4Z0 139 aaKnown RBP16.47■□□□□ 0.23
VSX1-202ENST00000376709 DLL1O00548 723 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 YIF1AO95070 293 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 RPS10P46783 165 aaKnown RBP16.47■□□□□ 0.23
VSX1-202ENST00000376709 FBXL19-AS1Q494R0 122 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 MUC15Q8N387 334 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 OR5AN1Q8NGI8 311 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 NAT8Q9UHE5 227 aa16.47■□□□□ 0.23
VSX1-202ENST00000376709 TEX50A0A1B0GTY4 177 aa16.46■□□□□ 0.23
VSX1-202ENST00000376709 RAB31Q13636 194 aa16.46■□□□□ 0.23
VSX1-202ENST00000376709 LY6DQ14210 128 aa16.46■□□□□ 0.23
VSX1-202ENST00000376709 OR5B3Q8NH48 314 aa16.46■□□□□ 0.23
VSX1-202ENST00000376709 TMEM186Q96B77 213 aa16.46■□□□□ 0.23
VSX1-202ENST00000376709 FLYWCH2Q96CP2 140 aaKnown RBP16.46■□□□□ 0.23
VSX1-202ENST00000376709 LRBAP50851 2863 aa16.46■□□□□ 0.23
VSX1-202ENST00000376709 TGIF2-C20orf24A0A0A6YYL0 155 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 UBE2CO00762 179 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 TMEM155Q4W5P6 130 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 C11orf94C9JXX5 98 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 B2MP61769 119 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 FABP9Q0Z7S8 132 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 ADIRFQ15847 76 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 TMEM241Q24JQ0 296 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 CYP2G1PQ6ZSU1 146 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 C8orf31Q8N9H6 132 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 COMMD5Q9GZQ3 224 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 PARLQ9H300 379 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 PIEZO1Q92508 2521 aa16.45■□□□□ 0.22
VSX1-202ENST00000376709 SIAH2O43255 324 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 DLX6P56179 175 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 DIAPH2-AS1Q14236 149 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 FAM71F2Q6NXP2 309 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 UNQ6494/PRO21346Q6UXR6 183 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 C1QL4Q86Z23 238 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 LINC00311Q8N616 119 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 OR4C13Q8NGP0 309 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 NEIL1Q96FI4 390 aaPredicted RBP16.44■□□□□ 0.22
VSX1-202ENST00000376709 C1orf159Q96HA4 380 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 LYNX1G3V0Z9 82 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 IGHV2-5P01817 119 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 IGHV1-8P0DP01 117 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 LYNX1P0DP58 116 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 TMEM177Q53S58 311 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 OR9G1Q8NH87 305 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 TMEM242Q9NWH2 141 aa16.44■□□□□ 0.22
VSX1-202ENST00000376709 TPRP12270 2363 aaKnown RBP16.43■□□□□ 0.22
VSX1-202ENST00000376709 CLDN34H7C241 214 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 UBE2G2P60604 165 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 TMEM249Q2WGJ8 235 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 PDPNQ86YL7 162 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 STPG3Q8N7X2 389 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 ZNF596Q8TC21 504 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 NABP2Q9BQ15 211 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 ARL14EPLP0DKL9 152 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 MEOX2P50222 304 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 RPL8P62917 257 aaKnown RBP16.43■□□□□ 0.22
VSX1-202ENST00000376709 CST9LP1Q5W188 147 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 TGIF2LXQ8IUE1 241 aa16.43■□□□□ 0.22
VSX1-202ENST00000376709 METTL1Q9UBP6 276 aaKnown RBP16.43■□□□□ 0.22
VSX1-202ENST00000376709 TRBV23-1A0A0A0MS06 115 aa16.42■□□□□ 0.22
VSX1-202ENST00000376709 NDUFS6O75380 124 aaKnown RBP16.42■□□□□ 0.22
VSX1-202ENST00000376709 OR10W1Q8NGF6 305 aa16.42■□□□□ 0.22
VSX1-202ENST00000376709 SSX3Q99909 188 aa16.42■□□□□ 0.22
VSX1-202ENST00000376709 PRORYQ9H606 182 aa16.42■□□□□ 0.22
VSX1-202ENST00000376709 RALYQ9UKM9 306 aaKnown RBP16.42■□□□□ 0.22
VSX1-202ENST00000376709 COL6A6A6NMZ7 2263 aa16.42■□□□□ 0.22
VSX1-202ENST00000376709 A0A087X0M5 115 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 A0A1B0GX30 115 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 FNDC10F2Z333 226 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 IGFBP2P18065 325 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 USF1P22415 310 aaPredicted RBP16.41■□□□□ 0.22
VSX1-202ENST00000376709 COL8A2P25067 703 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 ZNF672Q499Z4 452 aaPredicted RBP16.41■□□□□ 0.22
VSX1-202ENST00000376709 VSTM2AQ8TAG5 236 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 ABHD5Q8WTS1 349 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 ST6GALNAC6Q969X2 333 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 WASHC3Q9Y3C0 194 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 CXorf1O96002 111 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 STAG3L2P0CL84 134 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 STAG3L3P0CL85 134 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 RPL29P47914 159 aaKnown RBP16.41■□□□□ 0.22
VSX1-202ENST00000376709 ATP5IP56385 69 aaPredicted RBP16.41■□□□□ 0.22
VSX1-202ENST00000376709 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 C2orf83Q53S99 150 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 SPNS3Q6ZMD2 512 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 CTDSP1Q9GZU7 261 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 TMEM133Q9H2Q1 129 aa16.41■□□□□ 0.22
VSX1-202ENST00000376709 PDE6DO43924 150 aa16.4■□□□□ 0.22
VSX1-202ENST00000376709 OR1L8Q8NGR8 309 aa16.4■□□□□ 0.22
VSX1-202ENST00000376709 FAM122AQ96E09 287 aa16.4■□□□□ 0.22
VSX1-202ENST00000376709 AP4M1O00189 453 aa16.4■□□□□ 0.22
VSX1-202ENST00000376709 IL3RAP26951 378 aa16.4■□□□□ 0.22
VSX1-202ENST00000376709 ZNF137PP52743 207 aa16.4■□□□□ 0.22
VSX1-202ENST00000376709 RHOBP62745 196 aa16.4■□□□□ 0.22
VSX1-202ENST00000376709 RPL23P62829 140 aaKnown RBP16.4■□□□□ 0.22
VSX1-202ENST00000376709 KIAA0141Q14154 515 aaPredicted RBP16.4■□□□□ 0.22
VSX1-202ENST00000376709 NDUFA4L2Q9NRX3 87 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms