RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 FAM90A12PA8MX19 464 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FAM90A5PA8MXJ8 464 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 TRGV3P03979 118 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FAM90A15PP0C7V4 464 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FAM90A13PP0C7W8 464 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FAM90A14PP0C7W9 464 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FAM90A24PP0C7X0 464 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 ZNF688P0C7X2 276 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 SAXO1Q8IYX7 474 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 LILRA6Q6PI73 481 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 ZNF600Q6ZNG1 722 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 SIP14410 1827 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 AQP3Q92482 292 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 RBM38Q9H0Z9 239 aaKnown RBP10.68□□□□□ -0.7
VPS13A-204ENST00000376634 SEMA5BQ9P283 1151 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 SMAD7O15105 426 aaKnown RBP10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FOXH1O75593 365 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 TDGF1P13385 188 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FMC1Q96HJ9 113 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 TRAV12-3A0A0B4J271 114 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 ASAH2BP0C7U1 165 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 FGFRL1Q8N441 504 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
VPS13A-204ENST00000376634 SPINT1O43278 529 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 OR9G1Q8NH87 305 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-204ENST00000376634 FHL5Q5TD97 284 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 STPG1Q5TH74 334 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 ABHD12Q8N2K0 398 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 PLXNA4Q9HCM2 1894 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 C1QL1O75973 258 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 NANOS3P60323 173 aaKnown RBP10.67□□□□□ -0.7
VPS13A-204ENST00000376634 WDR82Q6UXN9 313 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 PUSL1Q8N0Z8 303 aaKnown RBP10.67□□□□□ -0.7
VPS13A-204ENST00000376634 ALX4Q9H161 411 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-204ENST00000376634 A0A1W2PPC1 479 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 SIGLEC5O15389 551 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 ZNF826PQ6ZT77 177 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 SDHCQ99643 169 aaPredicted RBP10.67□□□□□ -0.7
VPS13A-204ENST00000376634 PKIBQ9C010 78 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 TOMM7Q9P0U1 55 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 CBLN1P23435 193 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 ZP4Q12836 540 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 CRYBB3P26998 211 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 UNC119Q13432 240 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 TMEM42Q69YG0 159 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 LEAP2Q969E1 77 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 ZPLD1Q8TCW7 415 aa10.67□□□□□ -0.7
VPS13A-204ENST00000376634 PAX1P15863 534 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 ATP5IP56385 69 aaPredicted RBP10.66□□□□□ -0.7
VPS13A-204ENST00000376634 TMEM186Q96B77 213 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 PEX7O00628 323 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 IGHV4-39P01824 125 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 VSIG10L2P0DP72 767 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 ACSF3Q4G176 576 aaPredicted RBP10.66□□□□□ -0.7
VPS13A-204ENST00000376634 PGLYRP1O75594 196 aaPredicted RBP10.66□□□□□ -0.7
VPS13A-204ENST00000376634 CA7P43166 264 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 ZNF106Q9H2Y7 1883 aaKnown RBP10.66□□□□□ -0.7
VPS13A-204ENST00000376634 NDUFA3O95167 84 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 CXCL2P19875 107 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 SELENOHQ8IZQ5 122 aaKnown RBP10.66□□□□□ -0.7
VPS13A-204ENST00000376634 KIR3DL3Q8N743 410 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 ELF5Q9UKW6 265 aaPredicted RBP10.66□□□□□ -0.7
VPS13A-204ENST00000376634 NRXN2Q9P2S2 1712 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 HSPE1P61604 102 aaKnown RBP10.66□□□□□ -0.7
VPS13A-204ENST00000376634 CLDN16Q9Y5I7 305 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 B9A039 149 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 CDK2AP2O75956 126 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 IGHV1-69-2A0A0G2JMI3 117 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 PNKDQ8N490 385 aa10.66□□□□□ -0.7
VPS13A-204ENST00000376634 GPX4P36969 197 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-204ENST00000376634 PRSS53Q2L4Q9 553 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 SNAI3Q3KNW1 292 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 KLF14Q8TD94 323 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-204ENST00000376634 SMIM8Q96KF7 97 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 H3BTX0 84 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 MOSP00540 346 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 IRF3Q14653 427 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 ZAR1Q86SH2 424 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 DTX4Q9Y2E6 619 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 HIST1H2BAQ96A08 127 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 SLC25A2Q9BXI2 301 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 GCM2O75603 506 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-204ENST00000376634 CRPP02741 224 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 SCARF2Q96GP6 870 aaPredicted RBP10.65□□□□□ -0.7
VPS13A-204ENST00000376634 WNT10AQ9GZT5 417 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 PRSS23O95084 383 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 PAX2Q02962 417 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 OR10J3Q5JRS4 329 aa10.65□□□□□ -0.7
VPS13A-204ENST00000376634 A0A1B0GW15 77 aa10.65□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3-48P01763 117 aa10.65□□□□□ -0.71
VPS13A-204ENST00000376634 NRTNQ99748 197 aa10.65□□□□□ -0.71
VPS13A-204ENST00000376634 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.71
VPS13A-204ENST00000376634 ZNF79Q15937 498 aa10.65□□□□□ -0.71
VPS13A-204ENST00000376634 GPR146Q96CH1 333 aa10.65□□□□□ -0.71
VPS13A-204ENST00000376634 TMEM74BQ9NUR3 256 aa10.65□□□□□ -0.71
VPS13A-204ENST00000376634 LDLRAD4O15165 306 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms