RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TMEM179BQ7Z7N9 219 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 ZNF843Q8N446 348 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 TMEM99Q8N816 258 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 ZNF300Q96RE9 604 aaPredicted RBP7.37□□□□□ -1.23
UBR4-201ENST00000375218 RALGAPA1Q6GYQ0 2036 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 TRGV10A0A0A0MS01 117 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 FOXS1O43638 330 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 ZNF728P0DKX0 622 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 UBE2NP61088 152 aaKnown RBP7.37□□□□□ -1.23
UBR4-201ENST00000375218 CSRP2Q16527 193 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 LCN15Q6UWW0 184 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 TWIST2Q8WVJ9 160 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 DPY30Q9C005 99 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 PI4KAP42356 2102 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 OR2T8A6NH00 312 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 FAM90A26D6RGX4 464 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 DPTQ07507 201 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 BCDIN3DQ7Z5W3 292 aaKnown RBP7.37□□□□□ -1.23
UBR4-201ENST00000375218 SGPP2Q8IWX5 399 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 ZNF114Q8NC26 417 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 SEC11CQ9BY50 192 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 ESM1Q9NQ30 184 aa7.37□□□□□ -1.23
UBR4-201ENST00000375218 CDC14CA4D256 554 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 LGALS1P09382 135 aaKnown RBP7.36□□□□□ -1.23
UBR4-201ENST00000375218 SLC35G6P0C7Q6 338 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H1DP16402 221 aaKnown RBP7.36□□□□□ -1.23
UBR4-201ENST00000375218 SPSB3Q6PJ21 355 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 C10orf126Q8N4M7 172 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 SUMF2Q8NBJ7 301 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 SLC25A40Q8TBP6 338 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 STARD5Q9NSY2 213 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 EHFQ9NZC4 300 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 LYRM9A8MSI8 78 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 LOC730098B7Z3J9 87 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 P2RX1P51575 399 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 RND2P52198 227 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 OOSP2Q86WS3 158 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 OR2T6Q8NHC8 308 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 NPVFQ9HCQ7 196 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 CACNA1EQ15878 2313 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 ARL16Q0P5N6 197 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 GSG1Q2KHT4 349 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 OR11H6Q8NGC7 330 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 APOBEC4Q8WW27 367 aaKnown RBP7.36□□□□□ -1.23
UBR4-201ENST00000375218 SRSF12Q8WXF0 261 aaKnown RBP7.36□□□□□ -1.23
UBR4-201ENST00000375218 TMEM18Q96B42 140 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 DYSFO75923 2080 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 PGLYRP1O75594 196 aaPredicted RBP7.36□□□□□ -1.23
UBR4-201ENST00000375218 HRASP01112 189 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 KRASP01116 189 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 OR9G9P0C7N8 305 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 PSG9Q00887 426 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 MRPL54Q6P161 138 aaKnown RBP7.36□□□□□ -1.23
UBR4-201ENST00000375218 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 OR52R1Q8NGF1 315 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 DDB2Q92466 427 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 FMC1Q96HJ9 113 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 EXOSC3Q9NQT5 275 aaKnown RBP7.36□□□□□ -1.23
UBR4-201ENST00000375218 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 MTFP1Q9UDX5 166 aa7.36□□□□□ -1.23
UBR4-201ENST00000375218 HAX1O00165 279 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 TOXO94900 526 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 GPX1P07203 203 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 CELA2AP08217 269 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 NHLRC4P0CG21 123 aaPredicted RBP7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 SNCAP37840 140 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 FBXW4P57775 412 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 ATP5G2Q06055 141 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 CEACAM16Q2WEN9 425 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
UBR4-201ENST00000375218 LY6G5BQ8NDX9 201 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 PLPP5Q8NEB5 264 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 SLC25A38Q96DW6 304 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 FRG2BQ96QU4 278 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 AIG1Q9NVV5 245 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 TAS2R5Q9NYW4 299 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 UQCR10Q9UDW1 63 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 HEATR5AQ86XA9 2040 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 KIF26BQ2KJY2 2108 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 NTN1O95631 604 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 PFN2P35080 140 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 SEC61A1P61619 476 aaKnown RBP7.35□□□□□ -1.23
UBR4-201ENST00000375218 ZNF146Q15072 292 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 ZNF141Q15928 474 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 PATE1Q8WXA2 126 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 CLCF1Q9UBD9 225 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 CTLA4P16410 223 aa7.35□□□□□ -1.23
UBR4-201ENST00000375218 NDUFV3P56181 108 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms