RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 ANKRD31Q8N7Z5 1873 aa16.82■□□□□ 0.28
COL15A1-201ENST00000375001 NPFFO15130 113 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 GAGE2BQ13066 116 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 GAGE2EQ4V326 116 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 ORMDL3Q8N138 153 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 PKIBQ9C010 78 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 RNASE7Q9H1E1 156 aaKnown RBP16.81■□□□□ 0.28
COL15A1-201ENST00000375001 GAGE2DQ9UEU5 116 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 IGFBP2P18065 325 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 PAX2Q02962 417 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 PIKFYVEQ9Y2I7 2098 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 SYNGR3O43761 229 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 FAM106CPP0CH98 169 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 LEPP41159 167 aa16.81■□□□□ 0.28
COL15A1-201ENST00000375001 IGKV3-20P01619 116 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 ZNF479Q96JC4 524 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 VKORC1Q9BQB6 163 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 C16orf97H3BN30 126 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 HIST3H2BBQ8N257 126 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 TDRD15B5MCY1 1934 aaKnown RBP16.8■□□□□ 0.28
COL15A1-201ENST00000375001 HOXA3O43365 443 aaPredicted RBP16.8■□□□□ 0.28
COL15A1-201ENST00000375001 SMIM10L1P0DMW3 83 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 GAGE13Q4V321 117 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 SMIM10Q96HG1 83 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 JPT1Q9UK76 154 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 CELA2AP08217 269 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 SAMD5Q5TGI4 173 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 CTHRC1Q96CG8 243 aa16.8■□□□□ 0.28
COL15A1-201ENST00000375001 ZNF501Q96CX3 271 aaPredicted RBP16.8■□□□□ 0.28
COL15A1-201ENST00000375001 A8MWV9 139 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 ZFAND6Q6FIF0 208 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 HEPN1Q6WQI6 88 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 DEFB123Q8N688 67 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 APC2O95996 2303 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 PLAURQ03405 335 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 RTBDNQ9BSG5 229 aaPredicted RBP16.79■□□□□ 0.28
COL15A1-201ENST00000375001 TPTE2P1Q5T6R2 138 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 CYSLTR1Q9Y271 337 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 C5orf67F2Z3F1 127 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 SLC25A28Q96A46 364 aa16.79■□□□□ 0.28
COL15A1-201ENST00000375001 CEACAM4O75871 244 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 TSPOP30536 169 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 FOXD3Q9UJU5 478 aaPredicted RBP16.78■□□□□ 0.28
COL15A1-201ENST00000375001 CEP290O15078 2479 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 RAX2Q96IS3 184 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 TTTY12Q9BZ98 90 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 TOMM7Q9P0U1 55 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 LOC101059948A0A1B0GTJ6 334 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 ADRA2AP08913 450 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 GTSF1LQ9H1H1 148 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 AMBPP02760 352 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 NPPCP23582 126 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 PMS2CLQ68D20 193 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 SCN2AQ99250 2005 aa16.78■□□□□ 0.28
COL15A1-201ENST00000375001 COL11A2P13942 1736 aaPredicted RBP16.78■□□□□ 0.28
COL15A1-201ENST00000375001 TNFSF13O75888 250 aa16.77■□□□□ 0.28
COL15A1-201ENST00000375001 MIR17HGQ75NE6 70 aa16.77■□□□□ 0.28
COL15A1-201ENST00000375001 SAXO1Q8IYX7 474 aa16.77■□□□□ 0.28
COL15A1-201ENST00000375001 EGR4Q05215 589 aa16.77■□□□□ 0.28
COL15A1-201ENST00000375001 NR2C2APQ86WQ0 139 aa16.77■□□□□ 0.28
COL15A1-201ENST00000375001 PLXNB2O15031 1838 aa16.77■□□□□ 0.27
COL15A1-201ENST00000375001 C1QL2Q7Z5L3 287 aa16.77■□□□□ 0.27
COL15A1-201ENST00000375001 DEFB124Q8NES8 71 aa16.77■□□□□ 0.27
COL15A1-201ENST00000375001 CITED2Q99967 270 aaPredicted RBP16.77■□□□□ 0.27
COL15A1-201ENST00000375001 RPL39P5Q59GN2 51 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 RNF126Q9BV68 326 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 TNFRSF18Q9Y5U5 241 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 FTH1P19P0C7X4 201 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 JMJD8Q96S16 334 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 TRAV21A0A0B4J279 112 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.76■□□□□ 0.27
COL15A1-201ENST00000375001 COLCA2A8K830 154 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 SEC11AP67812 179 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 TEX45Q8NA69 505 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 IFI27L2Q9H2X8 130 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 ZNF525Q8N782 197 aa16.76■□□□□ 0.27
COL15A1-201ENST00000375001 ASIPP42127 132 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 NEUROG3Q9Y4Z2 214 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 A0A1B0GW15 77 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 H3BRM9 83 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 GATA2P23769 480 aaPredicted RBP16.75■□□□□ 0.27
COL15A1-201ENST00000375001 CNTFRP26992 372 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 RAB9AP51151 201 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 SRSF6Q13247 344 aaKnown RBP16.75■□□□□ 0.27
COL15A1-201ENST00000375001 FER1L6-AS1Q8NA97 138 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 FMC1Q96HJ9 113 aa16.75■□□□□ 0.27
COL15A1-201ENST00000375001 PRTN3P24158 256 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 SPEM2Q0P670 501 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 C1orf174Q8IYL3 243 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 COQ2Q96H96 371 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 C2orf88Q9BSF0 95 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 IGHV3-49A0A0A0MS15 119 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 PROB1E7EW31 1015 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 CXCL1P09341 107 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 UCP1P25874 307 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 BTCP35070 178 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 FAM106AQ4KMX7 169 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 C1QL4Q86Z23 238 aa16.74■□□□□ 0.27
COL15A1-201ENST00000375001 OR52E5Q8NH55 327 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms