RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 IGHG3P01860 377 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 HSPB1P04792 205 aaKnown RBP6.88□□□□□ -1.31
GARNL3-201ENST00000373386 IGFBP2P18065 325 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 FCGR2BP31994 310 aaPredicted RBP6.88□□□□□ -1.31
GARNL3-201ENST00000373386 EWSR1Q01844 656 aaKnown RBP eCLIP6.88□□□□□ -1.31
GARNL3-201ENST00000373386 CATR1Q13166 79 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 LCN15Q6UWW0 184 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 OCC1Q8TAD7 63 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 C1QTNF5Q9BXJ0 243 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 SRXN1Q9BYN0 137 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 ST20Q9HBF5 79 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 ZNF286AQ9HBT8 521 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 ABCA7Q8IZY2 2146 aa6.88□□□□□ -1.31
GARNL3-201ENST00000373386 A0A0U1RRA0 63 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 RBFOX3A6NFN3 312 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 ENSAO43768 121 aaKnown RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 CGAP01215 116 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 SRP19P09132 144 aaKnown RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 CT45A6P0DMU7 189 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 CT45A5P0DMU8 189 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 CT45A7P0DMV0 189 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 RND3P61587 244 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 PHLDA2Q53GA4 152 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 CT45A1Q5HYN5 189 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 ZNF880Q6PDB4 577 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 SPSB3Q6PJ21 355 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 TMEM256Q8N2U0 113 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 CT45A3Q8NHU0 189 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 MAFAQ8NHW3 353 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 DUX3Q96PT4 197 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 CACNA1EQ15878 2313 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 BDP1A6H8Y1 2624 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 SEC16AO15027 2179 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 MUC21A0A0G2JKD1 596 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 MUC21A0A140T8X8 626 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 TNFSF11O14788 317 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 PHF1O43189 567 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 OR7C1O76099 320 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 P04436 131 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 OPRM1P35372 400 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 YPEL3P61236 119 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 HERV-K104P61576 105 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 PSG4Q00888 419 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 MUC21Q5SSG8 566 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 TSPO2Q5TGU0 170 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 LINC00596Q86U02 117 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 BORCS8Q96FH0 119 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 SPIN2AQ99865 258 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 SPIN2BQ9BPZ2 258 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 OR2H1Q9GZK4 316 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 OR2D2Q9H210 308 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 ZNF816-ZNF321PA0A0X1KG74 233 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 J3KT08 172 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 TNFSF12O43508 249 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 ZNF883P0CG24 379 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 SLC25A6P12236 298 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 KRTDAPP60985 99 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 MEF2CQ06413 473 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 PMCHL1Q16048 86 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 OR10P1Q8NGE3 313 aa6.87□□□□□ -1.31
GARNL3-201ENST00000373386 COL25A1Q9BXS0 654 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-201ENST00000373386 ANGPTL7O43827 346 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 PDCD6O75340 191 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 FCN3O75636 299 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 MOSP00540 346 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 C8orf88P0DMB2 117 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
GARNL3-201ENST00000373386 MSMO1Q15800 293 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 LRRC75BQ2VPJ9 315 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 FBXL14Q8N1E6 418 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 ADTRPQ96IZ2 230 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 FOXB1Q99853 325 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 SLC25A33Q9BSK2 321 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 SAMD10Q9BYL1 202 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 C11orf1Q9H5F2 150 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 PLEKHF2Q9H8W4 249 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 IGKV1-27A0A075B6S5 117 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 A0A1B0GV50 99 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 MBD3L4A6NDZ8 208 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-201ENST00000373386 MBD3L3A6NE82 208 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-201ENST00000373386 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 MBD3L5A6NJ08 208 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-201ENST00000373386 LRRC3CA6NJW4 275 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 SS18L1O75177 396 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-201ENST00000373386 MT-CO3P00414 261 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 ZNF787Q6DD87 383 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 AAED1Q7RTV5 226 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 FAM19A5Q7Z5A7 132 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-201ENST00000373386 OR10D3Q8NH80 312 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 PIGCQ92535 297 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 GNPNAT1Q96EK6 184 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-201ENST00000373386 RARRES2Q99969 163 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
GARNL3-201ENST00000373386 ASXL3Q9C0F0 2248 aa6.85□□□□□ -1.31
GARNL3-201ENST00000373386 TRBV6-6A0A0A6YYG2 114 aa6.85□□□□□ -1.31
GARNL3-201ENST00000373386 C3orf85A0A1B0GTC6 90 aa6.85□□□□□ -1.31
GARNL3-201ENST00000373386 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
GARNL3-201ENST00000373386 PFN1P07737 140 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms