RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CD33P20138 364 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 CGAP01215 116 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 FAM106CPP0CH98 169 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 CCL7P80098 99 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 ADAMTSL5Q6ZMM2 481 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 THY1P04216 161 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 TOMM40O96008 361 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 ASIPP42127 132 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 CLDND2Q8NHS1 167 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 IGHV3-72A0A0B4J1Y9 119 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 THADAQ6YHU6 1953 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 TMEM170AQ8WVE7 144 aa13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 RCC1LQ96I51 464 aaKnown RBP13.13□□□□□ -0.31
GTF3C4-201ENST00000372146 TRAV9-1A0A075B6T8 112 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 STARD6P59095 220 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 CBLN3Q6UW01 205 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 A0A1W2PPC1 479 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 CA11O75493 328 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 PGLYRP1O75594 196 aaPredicted RBP13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 EVI2AP22794 236 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 HEXA-AS1Q9H8Q6 139 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 A0A087X0K7 114 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 CA7P43166 264 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 LAMTOR1Q6IAA8 161 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 NANOS3P60323 173 aaKnown RBP13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 PRSS41Q7RTY9 318 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 NAPSAO96009 420 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 IFI27P40305 119 aaPredicted RBP13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 DPH3P1Q9H4G8 78 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 RNF186Q9NXI6 227 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 RFLNBQ8N5W9 214 aa13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
GTF3C4-201ENST00000372146 CD3EP07766 207 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 TMEM42Q69YG0 159 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 DIRC2Q96SL1 478 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 FAM90A26D6RGX4 464 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 TPRX1Q8N7U7 411 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 LIPT2A6NK58 231 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 PRRT4C9JH25 899 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 ICAM4Q14773 271 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 LOXL4Q96JB6 756 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 PCNX1Q96RV3 2341 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 TRBV5-4A0A0C4DH59 114 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 C16orf47Q6ZP98 133 aaPredicted RBP13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 PF4V1P10720 104 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 SDF2L1Q9HCN8 221 aa13.11□□□□□ -0.31
GTF3C4-201ENST00000372146 TSPAN7P41732 249 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 SMIM8Q96KF7 97 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 FBXL15Q9H469 300 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 ODAMA1E959 279 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 GZMBP10144 247 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 PEAR1Q5VY43 1037 aaPredicted RBP13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 SHISA7A6NL88 538 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 J3QT63 122 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 TNFSF13O75888 250 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 PSG3Q16557 428 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 KLHDC2Q9Y2U9 406 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 SRSF1Q07955 248 aaKnown RBP eCLIP13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 FBXW9Q5XUX1 488 aa13.1□□□□□ -0.31
GTF3C4-201ENST00000372146 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 CEACAM5P06731 702 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 SPEM2Q0P670 501 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 ATP5G2Q06055 141 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 MAFAQ8NHW3 353 aaPredicted RBP13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 NYNRINQ9P2P1 1898 aaKnown RBP13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 IGHV3-66A0A0C4DH42 116 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 A0A0U1RRA0 63 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 KIR3DS1Q14943 382 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 TMEM86BQ8N661 226 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 TMEM238C9JI98 176 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 HLA-DQB1P01920 261 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 UNQ5815/PRO19632Q6UWF5 114 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 BOD1L2Q8IYS8 172 aa13.09□□□□□ -0.31
GTF3C4-201ENST00000372146 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.31
GTF3C4-201ENST00000372146 KCNE1BA0A087WTH5 132 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 TMEM8BA6NDV4 472 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 CD8AP01732 235 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 HOXD3P31249 432 aaPredicted RBP13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 RPL32P62910 135 aaKnown RBP13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 Q6AWC8 147 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 ZNF146Q15072 292 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 ZNF818PQ6ZRF7 136 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 DUX3Q96PT4 197 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 SEMA5BQ9P283 1151 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 LRRC61Q9BV99 259 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 IGKV1D-42A0A075B6H8 117 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 CT62P0C5K7 136 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 GPR132Q9UNW8 380 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 GLRXP35754 106 aa13.08□□□□□ -0.32
GTF3C4-201ENST00000372146 FGF12P61328 243 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 302.9 ms