RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 LPCAT3Q6P1A2 487 aa12.16□□□□□ -0.46
VMA21-202ENST00000370361 MZT2AQ6P582 158 aa12.16□□□□□ -0.46
VMA21-202ENST00000370361 GDPD1Q8N9F7 314 aa12.16□□□□□ -0.46
VMA21-202ENST00000370361 OR1L8Q8NGR8 309 aa12.16□□□□□ -0.46
VMA21-202ENST00000370361 OR51H1Q8NH63 302 aa12.16□□□□□ -0.46
VMA21-202ENST00000370361 GPX8Q8TED1 209 aa12.16□□□□□ -0.46
VMA21-202ENST00000370361 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
VMA21-202ENST00000370361 MRPL27Q9P0M9 148 aaKnown RBP12.16□□□□□ -0.46
VMA21-202ENST00000370361 CGB1A6NKQ9 187 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 HLA-AP01891 365 aaKnown RBP12.15□□□□□ -0.46
VMA21-202ENST00000370361 CLEC3BP05452 202 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 CD7P09564 240 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 TRAPPC2P0DI81 140 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 TRAPPC2BP0DI82 140 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 C8orf88P0DMB2 117 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 GNRHRP30968 328 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 SPSB3Q6PJ21 355 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 PLET1Q6UQ28 207 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 OR5H2Q8NGV7 314 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 ZNF502Q8TBZ5 544 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 AP3S1Q92572 193 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 GPHA2Q96T91 129 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 TSC22D3Q99576 134 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 SRD5A3Q9H8P0 318 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
VMA21-202ENST00000370361 MFSD2BA6NFX1 497 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 SNAPC5O75971 98 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 S1PR2O95136 353 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 RFX2P48378 723 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 LYSMD2Q8IV50 215 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 UXS1Q8NBZ7 420 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 OR52B4Q8NGK2 314 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 OR6F1Q8NGZ6 308 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 LSM10Q969L4 123 aaKnown RBP12.14□□□□□ -0.47
VMA21-202ENST00000370361 DGCR14Q96DF8 476 aaKnown RBP12.14□□□□□ -0.47
VMA21-202ENST00000370361 WDR89Q96FK6 387 aaPredicted RBP12.14□□□□□ -0.47
VMA21-202ENST00000370361 BSCL2Q96G97 398 aaPredicted RBP12.14□□□□□ -0.47
VMA21-202ENST00000370361 ZNF2Q9BSG1 426 aaPredicted RBP12.14□□□□□ -0.47
VMA21-202ENST00000370361 ZNF436Q9C0F3 470 aaPredicted RBP12.14□□□□□ -0.47
VMA21-202ENST00000370361 GAR1Q9NY12 217 aaKnown RBP12.14□□□□□ -0.47
VMA21-202ENST00000370361 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
VMA21-202ENST00000370361 GPR31O00270 319 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
VMA21-202ENST00000370361 IGHV3-23P01764 117 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 PMP2P02689 132 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 REG1AP05451 166 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 SERPINE2P07093 398 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 GPR183P32249 361 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 SPCS2Q15005 226 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 ZFAND6Q6FIF0 208 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 RBPMS2Q6ZRY4 209 aaKnown RBP12.13□□□□□ -0.47
VMA21-202ENST00000370361 SNX29P2Q8IUI4 249 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 CLVS1Q8IUQ0 354 aaPredicted RBP12.13□□□□□ -0.47
VMA21-202ENST00000370361 SLC38A6Q8IZM9 456 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 TMEM61Q8N0U2 210 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 TMEM56Q96MV1 263 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
VMA21-202ENST00000370361 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
VMA21-202ENST00000370361 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
VMA21-202ENST00000370361 FAM25AB3EWG3 89 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 FAM25CB3EWG5 89 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 FAM25GB3EWG6 89 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 TGOLN2O43493 480 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 JTBO76095 146 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 RLN1P04808 185 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
VMA21-202ENST00000370361 OR13C7P0DN81 318 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 TMBIM6P55061 237 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 C19orf35Q6ZS72 473 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 RAB2BQ8WUD1 216 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
VMA21-202ENST00000370361 BCL7BQ9BQE9 202 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
VMA21-202ENST00000370361 NDUFA4L2Q9NRX3 87 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 MLXQ9UH92 298 aa12.12□□□□□ -0.47
VMA21-202ENST00000370361 F11RQ9Y624 299 aaKnown RBP12.12□□□□□ -0.47
VMA21-202ENST00000370361 HLA-DMAP28067 261 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 RCVRNP35243 200 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 HRH1P35367 487 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 RPL5P46777 297 aaKnown RBP12.11□□□□□ -0.47
VMA21-202ENST00000370361 LAMTOR1Q6IAA8 161 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 CACNG8Q8WXS5 425 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 TMEM190Q8WZ59 177 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 FAM110AQ9BQ89 295 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
VMA21-202ENST00000370361 TENM2Q9NT68 2774 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 LOC102724200A0A096LPH7 203 aaPredicted RBP12.1□□□□□ -0.47
VMA21-202ENST00000370361 TRAV3A0A0B4J244 114 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 NDUFA4O00483 81 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 SLC25A24Q6NUK1 477 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 UNQ9165/PRO28630Q6UXU0 137 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 OR2C3Q8N628 320 aa12.1□□□□□ -0.47
VMA21-202ENST00000370361 DYNC2LI1Q8TCX1 351 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms