RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 NPVFQ9HCQ7 196 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF581Q9P0T4 197 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 CFAP46Q8IYW2 2715 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 SPTA1P02549 2419 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 SDK2Q58EX2 2172 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 A0A087WUU8 490 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 FFAR1O14842 300 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 GPR137BO60478 399 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 TBL1XO60907 577 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 DBIP07108 87 aaKnown RBP4.19□□□□□ -1.74
UBE3D-202ENST00000369746 SP1P08047 785 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 PRSS56P0CW18 603 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 MEOX1P50221 254 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 INSL4Q14641 139 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 MPV17LQ2QL34 196 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 LIAT1Q6ZQX7 453 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 SAXO1Q8IYX7 474 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 BCL6BQ8N143 479 aaPredicted RBP4.19□□□□□ -1.74
UBE3D-202ENST00000369746 NEUROG1Q92886 237 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 ZC2HC1AQ96GY0 325 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 SGK494Q96LW2 274 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 SPANXDQ9BXN6 97 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 C5orf66Q9H5L9 145 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 GPR84Q9NQS5 396 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF71Q9NQZ8 489 aaPredicted RBP4.19□□□□□ -1.74
UBE3D-202ENST00000369746 TP53TG1Q9Y2A0 90 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 DUXBA0A1W2PPF3 345 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 DAPL1A0PJW8 107 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 A1L4Q6 167 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF850A8MQ14 1090 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 FABP5P3A8MUU1 101 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF736B4DX44 427 aaPredicted RBP4.19□□□□□ -1.74
UBE3D-202ENST00000369746 DEDDO75618 318 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CD3DP04234 171 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 ZGLP1P0C6A0 271 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CT45A6P0DMU7 189 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CT45A5P0DMU8 189 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CT45A7P0DMV0 189 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 LMO2P25791 158 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 FCGR2CP31995 323 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CD70P32970 193 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 GALR1P47211 349 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 GNB2P62879 340 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 GRB2P62993 217 aaKnown RBP4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CT45A1Q5HYN5 189 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 PQLC2Q6ZP29 291 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 Q6ZVH6 145 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 TPRX1Q8N7U7 411 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CYB561D1Q8N8Q1 229 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 THAP8Q8NA92 274 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 CT45A3Q8NHU0 189 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 GNPNAT1Q96EK6 184 aaPredicted RBP4.19□□□□□ -1.74
UBE3D-202ENST00000369746 NRTNQ99748 197 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 HSPB9Q9BQS6 159 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 ANAPC13Q9BS18 74 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 DNAJB12Q9NXW2 375 aaKnown RBP4.19□□□□□ -1.74
UBE3D-202ENST00000369746 KCNS2Q9ULS6 477 aa4.19□□□□□ -1.74
UBE3D-202ENST00000369746 TRAV18A0A075B6X5 111 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 TRAV17A0A0B4J275 112 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OR2T8A6NH00 312 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF732B4DXR9 585 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 EEF1E1-BLOC1S5C9J1V9 151 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 M0R2Z0 102 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OR7C1O76099 320 aaPredicted RBP4.18□□□□□ -1.74
UBE3D-202ENST00000369746 CYB5AP00167 134 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 FGF1P05230 155 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 AADACP22760 399 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 COL8A1P27658 744 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OR1D4P47884 311 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 RPS11P62280 158 aaKnown RBP eCLIP4.18□□□□□ -1.74
UBE3D-202ENST00000369746 RPS4XP62701 263 aaKnown RBP4.18□□□□□ -1.74
UBE3D-202ENST00000369746 DEFB133Q30KQ1 61 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 DEFB113Q30KQ7 82 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 C22orf39Q6P5X5 142 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 GLIPR1L1Q6UWM5 242 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 C9orf139Q6ZV77 190 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 HOGA1Q86XE5 327 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 SGPP2Q8IWX5 399 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 MORN4Q8NDC4 146 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OR5AR1Q8NGP9 310 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 ATP6V0E2Q8NHE4 81 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 CT55Q8WUE5 264 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 CST11Q9H112 138 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 MANBALQ9NQG1 85 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 EHFQ9NZC4 300 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 Q9UF83 564 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 SLC2A6Q9UGQ3 507 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 VSIG4Q9Y279 399 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 ODAMA1E959 279 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 F8W1H4 67 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 H0YJW9 148 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM250H0YL14 139 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 OVOL3O00110 214 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 ZIC3O60481 467 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 PRH1P02810 166 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 GPX1P07203 203 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 LHX2P50458 406 aa4.18□□□□□ -1.74
UBE3D-202ENST00000369746 SSR4P51571 173 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms