RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TSC22D3Q99576 134 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 SRSF8Q9BRL6 282 aaKnown RBP7.58□□□□□ -1.2
CD48-202ENST00000368046 FKBP11Q9NYL4 201 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 KLK9Q9UKQ9 250 aa7.58□□□□□ -1.2
CD48-202ENST00000368046 ANKRD20A5PA0PJZ0 165 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 OR2J3O76001 311 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 SERPINE2P07093 398 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 TRAPPC2P0DI81 140 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 TRAPPC2BP0DI82 140 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 DEFA4P12838 97 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 AREGP15514 252 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 HIST1H1BP16401 226 aaKnown RBP7.57□□□□□ -1.2
CD48-202ENST00000368046 S100A5P33763 92 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 ECI1P42126 302 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 PIGPP57054 158 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 KLF5Q13887 457 aaPredicted RBP7.57□□□□□ -1.2
CD48-202ENST00000368046 SCGB2B2Q4G0G5 96 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 DEFB121Q5J5C9 76 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 FAM209BQ5JX69 171 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 THOC7Q6I9Y2 204 aaKnown RBP7.57□□□□□ -1.2
CD48-202ENST00000368046 ACSM6Q6P461 480 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 HSD17B13Q7Z5P4 300 aaPredicted RBP7.57□□□□□ -1.2
CD48-202ENST00000368046 OR1L8Q8NGR8 309 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 MARCH1Q8TCQ1 289 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 SEC22AQ96IW7 307 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 OR4C12Q96R67 309 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 THAP7Q9BT49 309 aaPredicted RBP7.57□□□□□ -1.2
CD48-202ENST00000368046 ELOVL1Q9BW60 279 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 NDUFA4L2Q9NRX3 87 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 FBXL7Q9UJT9 491 aa7.57□□□□□ -1.2
CD48-202ENST00000368046 C3orf85A0A1B0GTC6 90 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 WI2-2373I1.2A0A1W2PRP0 233 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 K7EIL1 84 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 SAP30O75446 220 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 B3GALNT1O75752 331 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 IGKV1-39P01597 117 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 IGKV1D-39P04432 117 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 CTSDP07339 412 aaPredicted RBP7.56□□□□□ -1.2
CD48-202ENST00000368046 PI3P19957 117 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 SURF2Q15527 256 aaPredicted RBP7.56□□□□□ -1.2
CD48-202ENST00000368046 C15orf32Q32M92 178 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 CCDC71LQ8N9Z2 235 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 MRGPRFQ96AM1 343 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 QTRT1Q9BXR0 403 aaKnown RBP7.56□□□□□ -1.2
CD48-202ENST00000368046 THYN1Q9P016 225 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 NDUFA13Q9P0J0 144 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 COPZ2Q9P299 210 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 PRNDQ9UKY0 176 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 GPR132Q9UNW8 380 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 NSG2Q9Y328 171 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 OR51B2Q9Y5P1 312 aa7.56□□□□□ -1.2
CD48-202ENST00000368046 IGLC7A0M8Q6 106 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 H0Y980 276 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 CYB5BO43169 146 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 ATG12O94817 140 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 NDUFB8O95169 186 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 REG1AP05451 166 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 OR13C7P0DN81 318 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 DEFA5Q01523 94 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 FAAP20Q6NZ36 180 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 C19orf35Q6ZS72 473 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 H2BFWTQ7Z2G1 175 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 CCDC190Q86UF4 302 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 OR10W1Q8NGF6 305 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 OR4C16Q8NGL9 310 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 OR13C8Q8NGS7 320 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 OR5B3Q8NH48 314 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 OR4A16Q8NH70 328 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 TMEM56Q96MV1 263 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 TP53RKQ96S44 253 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 PRRT1Q99946 306 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 RTBDNQ9BSG5 229 aaPredicted RBP7.55□□□□□ -1.2
CD48-202ENST00000368046 TMEM14BQ9NUH8 114 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 SCP2D1Q9UJQ7 156 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 C14orf166Q9Y224 244 aaKnown RBP7.55□□□□□ -1.2
CD48-202ENST00000368046 DMRT1Q9Y5R6 373 aa7.55□□□□□ -1.2
CD48-202ENST00000368046 IGLV11-55A0A075B6I3 123 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.54□□□□□ -1.2
CD48-202ENST00000368046 GGCTO75223 188 aaKnown RBP7.54□□□□□ -1.2
CD48-202ENST00000368046 CDS2O95674 445 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 ETV6P41212 452 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 PPP5CP53041 499 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 HSPE1P61604 102 aaKnown RBP7.54□□□□□ -1.2
CD48-202ENST00000368046 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 EXOSC2Q13868 293 aaKnown RBP7.54□□□□□ -1.2
CD48-202ENST00000368046 RPEL1Q2QD12 228 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 SP6Q3SY56 376 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 PYDC2Q56P42 97 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 Q8N402 240 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 GDPD1Q8N9F7 314 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 OR51S1Q8NGJ8 323 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 OR9G4Q8NGQ1 327 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 OR1L6Q8NGR2 347 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 LSM10Q969L4 123 aaKnown RBP7.54□□□□□ -1.2
CD48-202ENST00000368046 EEF1AKMT3Q96AZ1 226 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 CXorf58Q96LI9 332 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 SCGB3A2Q96PL1 93 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 HINT2Q9BX68 163 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms