RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CXorf1O96002 111 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 HAND1O96004 215 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 ADH4P08319 380 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 STAG3L2P0CL84 134 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 STAG3L3P0CL85 134 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 NPPCP23582 126 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 TPPP2P59282 170 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 GAGE1Q13065 139 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 WDR86Q86TI4 376 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 LRRC75A-AS1Q8N1F1 130 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 C17orf78Q8N4C9 275 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 STARD4Q96DR4 205 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 TMEM68Q96MH6 324 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 WFIKKN1Q96NZ8 548 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 OR2D2Q9H210 308 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 CLN8Q9UBY8 286 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 FBN3Q75N90 2809 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 USF3Q68DE3 2245 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 ATRQ13535 2644 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 EREGO14944 169 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 MMP23AO75900 390 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 S1PR2O95136 353 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 LY6G6DO95868 133 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 MT-CO2P00403 227 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 IGHV3-9P01782 118 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 CCL2P13500 99 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 AREGP15514 252 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 BTF3P20290 206 aaKnown RBP9.51□□□□□ -0.89
USF1-201ENST00000368019 CA6P23280 308 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
USF1-201ENST00000368019 G6PCP35575 357 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 KIR2DS2P43631 304 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 RPL30P62888 115 aaKnown RBP9.51□□□□□ -0.89
USF1-201ENST00000368019 HTD2P86397 168 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 FAM27E3Q08E93 113 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 Q0VG73 95 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 ZNF474Q6S9Z5 364 aaPredicted RBP9.51□□□□□ -0.89
USF1-201ENST00000368019 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 CIARTQ8N365 385 aaPredicted RBP9.51□□□□□ -0.89
USF1-201ENST00000368019 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 SFRP2Q96HF1 295 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 MS4A10Q96PG2 267 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 SNHG12Q9BXW3 62 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 OR51B6Q9H340 312 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
USF1-201ENST00000368019 POLR3KQ9Y2Y1 108 aaPredicted RBP9.51□□□□□ -0.89
USF1-201ENST00000368019 FBN1P35555 2871 aaKnown RBP9.5□□□□□ -0.89
USF1-201ENST00000368019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.5□□□□□ -0.89
USF1-201ENST00000368019 A0A1W2PPV4 95 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 C12orf77C9JDV5 145 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 ITGB1BP1O14713 200 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 SMPD2O60906 423 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 LILRA1O75019 489 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 HPRT1P00492 218 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 CGAP01215 116 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 MT-ND6P03923 174 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 KITLGP21583 273 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 KIR2DL2P43627 348 aaPredicted RBP9.5□□□□□ -0.89
USF1-201ENST00000368019 OR3A1P47881 315 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 FOXG1P55316 489 aaPredicted RBP9.5□□□□□ -0.89
USF1-201ENST00000368019 Q5PR19 223 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 FBXW9Q5XUX1 488 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 VWA1Q6PCB0 445 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 PRSS57Q6UWY2 283 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 OR1L1Q8NH94 360 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 CMTM2Q8TAZ6 248 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 C5orf30Q96GV9 206 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 TMEM106BQ9NUM4 274 aa9.5□□□□□ -0.89
USF1-201ENST00000368019 KIAA2026Q5HYC2 2103 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 FREM1Q5H8C1 2179 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 SAA2-SAA4A0A096LPE2 208 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 TRGV10A0A0A0MS01 117 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 C17orf98A8MV24 154 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 PRSS46E5RG02 174 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 YPEL1O60688 119 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 RAMP3O60896 148 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 HBZP02008 142 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 REG1AP05451 166 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 SNRPCP09234 159 aaKnown RBP9.49□□□□□ -0.89
USF1-201ENST00000368019 OR4A8P0C604 315 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 OR10J4P0C629 311 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 LINC00614P0C842 121 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 CHRNA7P36544 502 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 BRWD1-AS2P59051 145 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 TGFBR3Q03167 851 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 GUSBP1Q15486 140 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 ZNF718Q3SXZ3 478 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 TEX38Q6PEX7 206 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 C22orf34Q6ZV56 151 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 PRIMA1Q86XR5 153 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 C1orf174Q8IYL3 243 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 SGMS2Q8NHU3 365 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 IGFBPL1Q8WX77 278 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
USF1-201ENST00000368019 SLC25A10Q9UBX3 287 aaPredicted RBP9.49□□□□□ -0.89
USF1-201ENST00000368019 SONP18583 2426 aaKnown RBP9.48□□□□□ -0.89
USF1-201ENST00000368019 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
USF1-201ENST00000368019 RPLP1P05386 114 aaKnown RBP9.48□□□□□ -0.89
USF1-201ENST00000368019 VDAC2P45880 294 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms