RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 RND2P52198 227 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 FOXL2P58012 376 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 C2orf83Q53S99 150 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 DEFB124Q8NES8 71 aa7.6□□□□□ -1.19
SYNE1-209ENST00000367257 HYAL3O43820 417 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-209ENST00000367257 PPBPP02775 128 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 CD5P06127 495 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF708P17019 499 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 CBLN1P23435 193 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 MIC13Q5XKP0 118 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 DMRTC2Q8IXT2 367 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-209ENST00000367257 SGK494Q96LW2 274 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 C20orf144Q9BQM9 153 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 SPTA1P02549 2419 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 EP300Q09472 2414 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-209ENST00000367257 TRBV24-1A0A075B6N3 115 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 A0A1B0GW64 132 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 B9A039 149 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 ECSCRQ19T08 205 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 OR5P3Q8WZ94 311 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 EVPLQ92817 2033 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 SPANXDQ9BXN6 97 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 PRRC2BQ5JSZ5 2229 aaKnown RBP7.59□□□□□ -1.19
SYNE1-209ENST00000367257 FOXH1O75593 365 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 IGHV4-34P06331 123 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 SCTP09683 121 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 NPPCP23582 126 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 ASIPP42127 132 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 HSD52Q0P140 79 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 C9orf50Q5SZB4 431 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 SMRP1Q8NCR6 262 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 YAE1D1Q9NRH1 226 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 MRPL16Q9NX20 251 aaKnown RBP7.59□□□□□ -1.19
SYNE1-209ENST00000367257 HILPDAQ9Y5L2 63 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 KNL1Q8NG31 2342 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 IZUMO1RA6ND01 250 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 FAM157AC9JC47 383 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 PIN1P1O15428 100 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 ZNF205O95201 554 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 IL11P20809 199 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 GAGE13Q4V321 117 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 DMRTC1Q5HYR2 192 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 HDHD3Q9BSH5 251 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-209ENST00000367257 SDF2L1Q9HCN8 221 aa7.59□□□□□ -1.19
SYNE1-209ENST00000367257 LOC105371242A0A075B767 164 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 PPIAL4CA0A0B4J2A2 164 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 RAMP3O60896 148 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 CELA2BP08218 269 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-209ENST00000367257 LINC00271P0C7V0 271 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 PPIAL4GP0DN37 164 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 DLX6P56179 175 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 KIAA1644Q3SXP7 199 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SLC25A53Q5H9E4 307 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 CXorf66Q5JRM2 361 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-209ENST00000367257 ZPLD1Q8TCW7 415 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SLC25A28Q96A46 364 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 IFI27L2Q9H2X8 130 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SMPXQ9UHP9 88 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 TRAV14DV4A0A0A6YYC5 116 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 A0A0G2JLM5 398 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 A0A1W2PP11 408 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 A0A1W2PQF6 199 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SYNGR3O43761 229 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 CXCL1P09341 107 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 UNC119Q13432 240 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SAMD5Q5TGI4 173 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 ZNF324BQ6AW86 544 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-209ENST00000367257 RASL11AQ6T310 242 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 FER1L6-AS1Q8NA97 138 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SRSF12Q8WXF0 261 aaKnown RBP7.58□□□□□ -1.2
SYNE1-209ENST00000367257 ZNF883P0CG24 379 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 TBR1Q16650 682 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 ATP5L2Q7Z4Y8 100 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 SS18L2Q9UHA2 77 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 CACNG7P62955 275 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 PRSS8Q16651 343 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 FAM219BQ5XKK7 198 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 TMEM52Q8NDY8 209 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 TMEM101Q96IK0 257 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 NPCDR1Q9BY65 106 aa7.58□□□□□ -1.2
SYNE1-209ENST00000367257 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 F8VVB4 439 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 F8VWA3 439 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 OR10J3Q5JRS4 329 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 ZNF488Q96MN9 340 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 SLC50A1Q9BRV3 221 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 CDH23Q9H251 3354 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 HRKO00198 91 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 ATXN7O15265 892 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-209ENST00000367257 IGHV2-5P01817 119 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 CENPWQ5EE01 88 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 Q8NFD4 153 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 ARID1BQ8NFD5 2236 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-209ENST00000367257 IGKV1-8A0A0C4DH67 115 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 CD5LO43866 347 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 IL6RP08887 468 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-209ENST00000367257 AZU1P20160 251 aa7.57□□□□□ -1.2
SYNE1-209ENST00000367257 CEACAM8P31997 349 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms