RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ASCL5Q7RTU5 278 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 MMD2Q8IY49 270 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 RNF7Q9UBF6 113 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 C1orf194Q5T5A4 169 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 MAP1LC3AQ9H492 121 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 BEX4Q9NWD9 120 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 ALPK3Q96L96 1907 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.55□□□□□ -1.683e-11■■■□□ 16.9
CDC42BPA-204ENST00000366767 HIST1H2BKO60814 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 VENTXO95231 258 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BJP06899 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 SRP19P09132 144 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BOP23527 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BBP33778 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BDP58876 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BCP62807 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST2H2BEQ16778 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 DEFB109BQ30KR1 87 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 FAM90A1Q86YD7 464 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BHQ93079 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 SNRNP40Q96DI7 357 aaKnown RBP4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 WBP1Q96G27 269 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BNQ99877 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 HIST1H2BMQ99879 126 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 CEP192Q8TEP8 1941 aa4.55□□□□□ -1.68
CDC42BPA-204ENST00000366767 PGPEP1LA6NFU8 196 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 NDUFB3O43676 98 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 PRDX2P32119 198 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 LHX2P50458 406 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 SOX8P57073 446 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 SHANK1Q9Y566 2161 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 IQCF6A8MYZ5 107 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 SYNGR1O43759 233 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF205O95201 554 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 ADMP35318 185 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 PAX2Q02962 417 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 LYPD6Q86Y78 171 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 IL36BQ9NZH7 164 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 C2orf16Q68DN1 1984 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM250H0YL14 139 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 K7N7A8 449 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 NDUFA2O43678 99 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 CKS2P33552 79 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 GGNQ86UU5 652 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 IMMP2LQ96T52 175 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 OR51B2Q9Y5P1 312 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 PXMP4Q9Y6I8 212 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM189A5PLL7 270 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 PPIAL4DF5H284 164 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 MKRN2OSH3BPM6 223 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TNFAIP6P98066 277 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TM4SF20Q53R12 229 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 HEPN1Q6WQI6 88 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 C1QL4Q86Z23 238 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 GRAMD2BQ96HH9 432 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 SFXN3Q9BWM7 321 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 CHODLQ9H9P2 273 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM106BQ9NUM4 274 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 CEP250Q9BV73 2442 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 COLCA2A8K830 154 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 SS18L1O75177 396 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 BMPERQ8N8U9 685 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 C1orf147Q96MC9 270 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 PAXXQ9BUH6 204 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 A0A1B0GWJ7 208 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 SPRY3O43610 288 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 RFPL3SP0C7P2 107 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 PSG1P11464 419 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 MRPS11P82912 194 aaKnown RBP4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 C10orf91Q5T1B1 145 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 OR4X2Q8NGF9 303 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 PRDM13Q9H4Q3 707 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 DENND4CQ5VZ89 1909 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TRAV9-2A0A087WT02 112 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMSB15BA0A087X1C1 80 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 LRRC10Q5BKY1 277 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF488Q96MN9 340 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 OBSL1O75147 1896 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 IGHV3-43A0A0B4J1X8 118 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TRAV38-1A0A0B4J264 116 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TGFAP01135 160 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 IGHV3-43DP0DP04 118 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 C3AR1Q16581 482 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 OR4C13Q8NGP0 309 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 CITED2Q99967 270 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 C19orf24Q9BVV8 132 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 NRN1Q9NPD7 142 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM242Q9NWH2 141 aa4.54□□□□□ -1.68
CDC42BPA-204ENST00000366767 KIAA1671Q9BY89 1806 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 TRAV9-1A0A075B6T8 112 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 ATXN7O15265 892 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 SERF1AO75920 110 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 B3GALT5-AS1P59052 145 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 RTP5Q14D33 572 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 GCSAMLQ5JQS6 135 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 LHFPL4Q7Z7J7 247 aa4.53□□□□□ -1.68
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