RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 H3BRM9 83 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 FAM216BQ8N7L0 139 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 RAMP1O60894 148 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 CFAP161Q6P656 301 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 TMEM95Q3KNT9 176 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 LINC01590Q5TEZ4 76 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 CYB5R2Q6BCY4 276 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 GATAD1Q8WUU5 269 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 GLMPQ8WWB7 406 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 SDF2L1Q9HCN8 221 aa15.53■□□□□ 0.08
SHANK1-202ENST00000359082 REPIN1Q9BWE0 567 aaKnown RBP15.52■□□□□ 0.08
SHANK1-202ENST00000359082 MRPL20Q9BYC9 149 aaKnown RBP15.52■□□□□ 0.08
SHANK1-202ENST00000359082 PEF1Q9UBV8 284 aaKnown RBP15.52■□□□□ 0.08
SHANK1-202ENST00000359082 ASCC3Q8N3C0 2202 aaKnown RBP15.52■□□□□ 0.08
SHANK1-202ENST00000359082 C12orf77C9JDV5 145 aa15.52■□□□□ 0.08
SHANK1-202ENST00000359082 PRDM6Q9NQX0 595 aa15.52■□□□□ 0.08
SHANK1-202ENST00000359082 TDRD15B5MCY1 1934 aaKnown RBP15.52■□□□□ 0.08
SHANK1-202ENST00000359082 IGHV3-11P01762 117 aa15.52■□□□□ 0.08
SHANK1-202ENST00000359082 ZNF324BQ6AW86 544 aaPredicted RBP15.52■□□□□ 0.08
SHANK1-202ENST00000359082 OR13A1Q8NGR1 328 aa15.52■□□□□ 0.08
SHANK1-202ENST00000359082 PSMG3Q9BT73 122 aaPredicted RBP15.52■□□□□ 0.08
SHANK1-202ENST00000359082 AICDAQ9GZX7 198 aa15.52■□□□□ 0.08
SHANK1-202ENST00000359082 TRBV7-9A0A0J9YWB2 115 aa15.52■□□□□ 0.07
SHANK1-202ENST00000359082 ZNF815PA8K554 130 aa15.52■□□□□ 0.07
SHANK1-202ENST00000359082 ATP5G3P48201 142 aa15.52■□□□□ 0.07
SHANK1-202ENST00000359082 RPP21Q9H633 154 aaKnown RBP15.52■□□□□ 0.07
SHANK1-202ENST00000359082 RGPD3A6NKT7 1758 aaPredicted RBP15.52■□□□□ 0.07
SHANK1-202ENST00000359082 A0A1B0GV72 72 aa15.52■□□□□ 0.07
SHANK1-202ENST00000359082 CECR9P0C854 216 aa15.52■□□□□ 0.07
SHANK1-202ENST00000359082 MIR17HGQ75NE6 70 aa15.52■□□□□ 0.07
SHANK1-202ENST00000359082 RNASEH2CQ8TDP1 164 aaKnown RBP15.52■□□□□ 0.07
SHANK1-202ENST00000359082 MALP21145 153 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 PPP1R32Q7Z5V6 425 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 SPOCK3Q9BQ16 436 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 ZNF703Q9H7S9 590 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-202ENST00000359082 LOC390937A0A1W2PQ73 354 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 SAA1P0DJI8 122 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-202ENST00000359082 TRGV2A0A075B6R0 118 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 RBMY1BA6NDE4 496 aaKnown RBP15.51■□□□□ 0.07
SHANK1-202ENST00000359082 RBMY1EA6NEQ0 496 aaKnown RBP15.51■□□□□ 0.07
SHANK1-202ENST00000359082 TMEM250H0YL14 139 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 RBMY1DP0C7P1 496 aaKnown RBP15.51■□□□□ 0.07
SHANK1-202ENST00000359082 RBMY1A1P0DJD3 496 aaKnown RBP15.51■□□□□ 0.07
SHANK1-202ENST00000359082 RBMY1CP0DJD4 496 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 CNTFRP26992 372 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 WDYHV1Q96HA8 205 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 ANKRD31Q8N7Z5 1873 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 OR5AN1Q8NGI8 311 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 FAM168AQ92567 244 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 RCC1LQ96I51 464 aaKnown RBP15.51■□□□□ 0.07
SHANK1-202ENST00000359082 Q9H3A6 140 aa15.51■□□□□ 0.07
SHANK1-202ENST00000359082 A0A0G2JMM0 328 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 A0A1W2PPB8 328 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 A0A1W2PRS3 328 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 KIR3DP1A8MWS1 328 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 APOMO95445 188 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 LEPP41159 167 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 TIMM23BQ5SRD1 257 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 OR52E5Q8NH55 327 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 GATA2P23769 480 aaPredicted RBP15.5■□□□□ 0.07
SHANK1-202ENST00000359082 DPM3Q9P2X0 92 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 TYMSP04818 313 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 OR4X2Q8NGF9 303 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 C21orf62Q9NYP8 219 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 GPX4P36969 197 aaPredicted RBP15.5■□□□□ 0.07
SHANK1-202ENST00000359082 CTHRC1Q96CG8 243 aa15.5■□□□□ 0.07
SHANK1-202ENST00000359082 ZP1P60852 638 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 SPSB2Q99619 263 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 RTN4RL2Q86UN3 420 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 TTC9CQ8N5M4 171 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 A0A1B0GWB2 263 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 CA7P43166 264 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 IGKV1D-43A0A0B4J1Z2 117 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 TM4SF5O14894 197 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 IGHV4-39P01824 125 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 GNG5P63218 68 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 YAE1D1Q9NRH1 226 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 CHCHD2Q9Y6H1 151 aaPredicted RBP15.49■□□□□ 0.07
SHANK1-202ENST00000359082 A0A0G2JLM5 398 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 GREM1O60565 184 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 EFEMP2O95967 443 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 OR10J3Q5JRS4 329 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 FER1L6-AS1Q8NA97 138 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 OSR1Q8TAX0 266 aaPredicted RBP15.49■□□□□ 0.07
SHANK1-202ENST00000359082 EFNB1P98172 346 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 DMRTA1Q5VZB9 504 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 COLCA1Q6ZS62 124 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 RPRMQ9NS64 109 aa15.49■□□□□ 0.07
SHANK1-202ENST00000359082 ARFGEF1Q9Y6D6 1849 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 VENTXO95231 258 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 TRAV12-3A0A0B4J271 114 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 ATP5LO75964 103 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 POLR2AP24928 1970 aaKnown RBP15.48■□□□□ 0.07
SHANK1-202ENST00000359082 ATG2BQ96BY7 2078 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 CELA3BP08861 270 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 GLRXP35754 106 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 FAM19A2Q8N3H0 131 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 OR5A1Q8NGJ0 315 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 C7orf69Q9H7B7 122 aa15.48■□□□□ 0.07
SHANK1-202ENST00000359082 IGHV2OR16-5A0A0B4J2B6 119 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms