RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 FCER1GP30273 86 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 CENPWQ5EE01 88 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 FAM216AQ8WUB2 273 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 SSBP4Q9BWG4 385 aaPredicted RBP8.38□□□□□ -1.07
RNF40-202ENST00000357890 LINC00470Q9BZP3 86 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 ZNF703Q9H7S9 590 aaPredicted RBP8.38□□□□□ -1.07
RNF40-202ENST00000357890 FZR1Q9UM11 496 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 ZNF835Q9Y2P0 537 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 COL5A1P20908 1838 aaPredicted RBP8.38□□□□□ -1.07
RNF40-202ENST00000357890 CXorf1O96002 111 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 RHOBP62745 196 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 IBA57Q5T440 356 aaKnown RBP8.38□□□□□ -1.07
RNF40-202ENST00000357890 STPG3Q8N7X2 389 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 DUSP13Q9UII6 198 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 LYZL6O75951 148 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 TIMP3P35625 211 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 NHLH1Q02575 133 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 AESQ08117 197 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 MOB1BQ7L9L4 216 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 BPIFA4PQ86YQ2 179 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 SPSB4Q96A44 273 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 FER1L6-AS2Q96M78 137 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 HILPDAQ9Y5L2 63 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 ADAMTS9Q9P2N4 1935 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 IGKV1-6A0A0C4DH72 117 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 PINLYPA6NC86 204 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 HAND1O96004 215 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 Q0VFX4 171 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 TM4SF20Q53R12 229 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 ASPHD1Q5U4P2 390 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 C12orf54Q6X4T0 127 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 LINC00596Q86U02 117 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 OR5P3Q8WZ94 311 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 TRAV24A0A0B4J272 114 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 MUC21A0A0G2JKD1 596 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 MUC21A0A140T8X8 626 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 TMEM30CPA0ZSE6 113 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 GAGE12BA1L429 117 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 CIDEAO60543 219 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 MUC21Q5SSG8 566 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 MDP1Q86V88 176 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 DRAM1Q8N682 238 aa8.37□□□□□ -1.07
RNF40-202ENST00000357890 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 CA2P00918 260 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 MT-ND6P03923 174 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 PRRX1P54821 245 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 TTTY12Q9BZ98 90 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 CADP27708 2225 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 TRAV9-2A0A087WT02 112 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 SPINT2O43291 252 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 MT-CO3P00414 261 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 HLA-DQA1P01909 254 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 GPR12P47775 334 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 C19orf35Q6ZS72 473 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 Q8IYB0 196 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 OR1L1Q8NH94 360 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 PYGO2Q9BRQ0 406 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 CLEC7AQ9BXN2 247 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 RRHO14718 337 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 CGAP01215 116 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 OR5AL1P0C617 328 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 FRMD6-AS1P0C7T7 363 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 RPL8P62917 257 aaKnown RBP8.36□□□□□ -1.07
RNF40-202ENST00000357890 FOXL1Q12952 345 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 ZNF826PQ6ZT77 177 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 VKORC1L1Q8N0U8 176 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 ARRDC1-AS1Q9H2J1 176 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 ZNF355PQ9NSJ1 428 aa8.36□□□□□ -1.07
RNF40-202ENST00000357890 TRAV30A0A087WSZ9 112 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 TMEM238C9JI98 176 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 MEOX1P50221 254 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 PDLIM4P50479 330 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 ABHD12Q8N2K0 398 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 Q8NFD4 153 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 RCHY1Q96PM5 261 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 IGKV3D-15A0A087WSY6 115 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 A0A087X0K7 114 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 IGHV2OR16-5A0A0B4J2B6 119 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 H3BUT2 72 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 IGKV1-5P01602 117 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 SAMD13Q5VXD3 122 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 MUC15Q8N387 334 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 SCCPDHQ8NBX0 429 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 LSM10Q969L4 123 aaKnown RBP8.35□□□□□ -1.07
RNF40-202ENST00000357890 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 RNF115Q9Y4L5 304 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 ISLRO14498 428 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 RAMP3O60896 148 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 TYMSP04818 313 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 HTR1DP28221 377 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
RNF40-202ENST00000357890 HAPLN4Q86UW8 402 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 OR8A1Q8NGG7 326 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 GMPPAQ96IJ6 420 aaPredicted RBP8.35□□□□□ -1.07
RNF40-202ENST00000357890 DOPEY2Q9Y3R5 2298 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms