RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PPP1R27Q86WC6 154 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 SPSB2Q99619 263 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 LNP1A1A4G5 178 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 BSPH1Q075Z2 132 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 OR5AC2Q9NZP5 309 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 KLK13Q9UKR3 277 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 TNFSF18Q9UNG2 199 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 PMCHL1Q16048 86 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 Q5PR19 223 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 LAMTOR3Q9UHA4 124 aa14.73□□□□□ -0.05
COL27A1-201ENST00000356083 ZNF107Q9UII5 783 aaPredicted RBP14.73□□□□□ -0.05
COL27A1-201ENST00000356083 PTPRFP10586 1907 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 OR11H7Q8NGC8 314 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 BCORQ6W2J9 1755 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 UQCR10Q9UDW1 63 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 FAM27E3Q08E93 113 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 RARRES2Q99969 163 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 CA11O75493 328 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 MARVELD1Q9BSK0 173 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 GPR132Q9UNW8 380 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 SAP30O75446 220 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 CLPSP04118 112 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 FAM201AQ5SY85 155 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 SPCS1Q9Y6A9 102 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 NPIPB8E9PQR5 432 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 NPIPB9F8W1W9 429 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 NPIPB7O75200 414 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 SERF2P84101 59 aa14.72□□□□□ -0.05
COL27A1-201ENST00000356083 WDR54Q9H977 334 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 RPRMQ9NS64 109 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 HLA-DQA1P01909 254 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 TAF15Q92804 592 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL27A1-201ENST00000356083 SLC25A2Q9BXI2 301 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 B9A039 149 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 VSIG8P0DPA2 414 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 SH3BGRL3Q9H299 93 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 AGAP20933 346 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 FGF9P31371 208 aaPredicted RBP14.71□□□□□ -0.05
COL27A1-201ENST00000356083 CENPWQ5EE01 88 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 RNF182Q8N6D2 247 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 OR9G1Q8NH87 305 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 ZNF625Q96I27 306 aaPredicted RBP14.71□□□□□ -0.05
COL27A1-201ENST00000356083 COX14Q96I36 57 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 H0Y980 276 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 ZNF585BQ52M93 769 aa14.71□□□□□ -0.05
COL27A1-201ENST00000356083 TRAF4Q9BUZ4 470 aaPredicted RBP14.71□□□□□ -0.05
COL27A1-201ENST00000356083 GGTLC3B5MD39 225 aa14.71□□□□□ -0.06
COL27A1-201ENST00000356083 RPL39P5Q59GN2 51 aa14.71□□□□□ -0.06
COL27A1-201ENST00000356083 OTOGLQ3ZCN5 2332 aa14.71□□□□□ -0.06
COL27A1-201ENST00000356083 OGG1O15527 345 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 EDIL3O43854 480 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 CYB5R2Q6BCY4 276 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 ZNF721Q8TF20 911 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 ARPC1AQ92747 370 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 WDR34Q96EX3 536 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 ZNF703Q9H7S9 590 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-201ENST00000356083 XAF1Q6GPH4 301 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 DTX4Q9Y2E6 619 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 PPIFP30405 207 aaKnown RBP14.7□□□□□ -0.06
COL27A1-201ENST00000356083 HOXD3P31249 432 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-201ENST00000356083 TGIF2-C20orf24A0A0A6YYL0 155 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 PTP4A3O75365 173 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 HBDP02042 147 aa14.7□□□□□ -0.06
COL27A1-201ENST00000356083 A0A1W2PQD3 144 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 IFNL4K9M1U5 179 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 TMEM50AO95807 157 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 CRYBA2P53672 197 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 DLL3Q9NYJ7 618 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 VENTXO95231 258 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 IGHV3-53P01767 116 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 TNFRSF9Q07011 255 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 VKORC1Q9BQB6 163 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 APOHP02749 345 aaPredicted RBP14.69□□□□□ -0.06
COL27A1-201ENST00000356083 SCAND1P57086 179 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 TMEM86BQ8N661 226 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 ADAMTSL1Q8N6G6 1762 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 CBLN1P23435 193 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 GALP22466 123 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 P2RY4P51582 365 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 ERVK11-1P61568 191 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 GHRHP01286 108 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 SURF2Q15527 256 aaPredicted RBP14.69□□□□□ -0.06
COL27A1-201ENST00000356083 LINC00527Q9UJ94 153 aa14.69□□□□□ -0.06
COL27A1-201ENST00000356083 HSPE1P61604 102 aaKnown RBP14.68□□□□□ -0.06
COL27A1-201ENST00000356083 OR11H4Q8NGC9 324 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 FHITP49789 147 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 NABP2Q9BQ15 211 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 CXorf65A6NEN9 183 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 MSGN1A6NI15 193 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 PGLYRP1O75594 196 aaPredicted RBP14.68□□□□□ -0.06
COL27A1-201ENST00000356083 TXNDC17Q9BRA2 123 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 TCRBV5S1A1TA0A578 114 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 TEX45Q8NA69 505 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 KLHDC2Q9Y2U9 406 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 ANXA2RQ3ZCQ2 193 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 LINC00299Q6ZSB3 139 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 C1QL2Q7Z5L3 287 aa14.68□□□□□ -0.06
COL27A1-201ENST00000356083 SP9P0CG40 484 aa14.67□□□□□ -0.06
COL27A1-201ENST00000356083 IFI27P40305 119 aaPredicted RBP14.67□□□□□ -0.06
COL27A1-201ENST00000356083 LAMB2P55268 1798 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms