RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 LINC00596Q86U02 117 aa11.4□□□□□ -0.59
EBF3-201ENST00000355311 ZCCHC14Q8WYQ9 949 aaKnown RBP11.4□□□□□ -0.59
EBF3-201ENST00000355311 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.59
EBF3-201ENST00000355311 CTDSP1Q9GZU7 261 aa11.4□□□□□ -0.59
EBF3-201ENST00000355311 ANKHD1Q8IWZ3 2542 aaKnown RBP11.39□□□□□ -0.59
EBF3-201ENST00000355311 DUXBA0A1W2PPF3 345 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 KLK10O43240 276 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 CHRNB4P30926 498 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 TMEM14EPQ6UXP3 125 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 STPG4Q8N801 248 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 CCL25O15444 150 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 KBTBD11O94819 623 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 ADMP35318 185 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 MRGPRGQ86SM5 289 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 HSPB7Q9UBY9 170 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 RNF24Q9Y225 148 aa11.39□□□□□ -0.59
EBF3-201ENST00000355311 DYSFO75923 2080 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 TRAV17A0A0B4J275 112 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 C15orf62A8K5M9 175 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 IL6RP08887 468 aaPredicted RBP11.38□□□□□ -0.59
EBF3-201ENST00000355311 CBLN1P23435 193 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 PSMB3P49720 205 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 SLC35B1P78383 322 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 SRSF7Q16629 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
EBF3-201ENST00000355311 MORN2Q502X0 79 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 ATOH7Q8N100 152 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 SARAFQ96BY9 339 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 A0A1W2PPV4 95 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 TMPRSS2O15393 492 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
EBF3-201ENST00000355311 MOB1BQ7L9L4 216 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 WFDC8Q8IUA0 241 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
EBF3-201ENST00000355311 AHRRA9YTQ3 701 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 CCKARP32238 428 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 MS4A5Q9H3V2 200 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 TP53TG3Q9ULZ0 132 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 LOC102724200A0A096LPH7 203 aaPredicted RBP11.37□□□□□ -0.59
EBF3-201ENST00000355311 PMS2P5A8MQ11 134 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 IGKV1-16P04430 117 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 CD1BP29016 333 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 LGALS4P56470 323 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 RBX1P62877 108 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 SLC35E4Q6ICL7 350 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 CMTM2Q8TAZ6 248 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 CIB3Q96Q77 187 aaPredicted RBP11.37□□□□□ -0.59
EBF3-201ENST00000355311 MIEN1Q9BRT3 115 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 TMEM106BQ9NUM4 274 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 IGHV3-21A0A0B4J1V1 117 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 C15orf65H3BRN8 121 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 LINC00614P0C842 121 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 KRTDAPP60985 99 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 PDLIM3Q53GG5 364 aaPredicted RBP11.37□□□□□ -0.59
EBF3-201ENST00000355311 VAMP8Q9BV40 100 aa11.37□□□□□ -0.59
EBF3-201ENST00000355311 SEPSECSQ9HD40 501 aaKnown RBP11.37□□□□□ -0.59
EBF3-201ENST00000355311 TRAV1-1A0A0B4J248 108 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 RNF212BA8MTL3 300 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 PRR33A8MZF0 331 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 SERF1AO75920 110 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 CDC34P49427 236 aaPredicted RBP11.36□□□□□ -0.59
EBF3-201ENST00000355311 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 LINC00310P59036 64 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 GAGE1Q13065 139 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 OR10W1Q8NGF6 305 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 FAM216AQ8WUB2 273 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 PINX1Q96BK5 328 aaKnown RBP11.36□□□□□ -0.59
EBF3-201ENST00000355311 S1PR3Q99500 378 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 HES4Q9HCC6 221 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 TMEM140Q9NV12 185 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 TP73-AS1Q9UF72 201 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 IGHV3-72A0A0B4J1Y9 119 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 NDUFB8O95169 186 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 ARL14EPLP0DKL9 152 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 CCL3L1P16619 93 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 DIAPH2-AS1Q14236 149 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 ACOT6Q3I5F7 207 aaPredicted RBP11.36□□□□□ -0.59
EBF3-201ENST00000355311 CT45A1Q5HYN5 189 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 FAM90A1Q86YD7 464 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 CT45A3Q8NHU0 189 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 SGK494Q96LW2 274 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 LRFN3Q9BTN0 628 aa11.36□□□□□ -0.59
EBF3-201ENST00000355311 SLC17A3O00476 420 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 OR10J4P0C629 311 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 COX5AP20674 150 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 C19orf35Q6ZS72 473 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 CISD2Q8N5K1 135 aaKnown RBP11.35□□□□□ -0.59
EBF3-201ENST00000355311 ST6GALNAC3Q8NDV1 305 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 MBD3L1Q8WWY6 194 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 CCL17Q92583 94 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 SELENOKQ9Y6D0 94 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 SERF2P84101 59 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 UNQ5815/PRO19632Q6UWF5 114 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 WNT10AQ9GZT5 417 aa11.35□□□□□ -0.59
EBF3-201ENST00000355311 FAM215AQ9Y5M1 114 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms