RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 FAM90A12PA8MX19 464 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM90A5PA8MXJ8 464 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM90A23PA8MXZ1 464 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM90A15PP0C7V4 464 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM90A13PP0C7W8 464 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM90A14PP0C7W9 464 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM90A24PP0C7X0 464 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF415Q09FC8 603 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 CDCP2Q5VXM1 449 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 PUSL1Q8N0Z8 303 aaKnown RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 GLMPQ8WWB7 406 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 NEU4Q8WWR8 484 aaPredicted RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 RPRMQ9NS64 109 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 CACNA1HO95180 2353 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ADARB2-AS1A8MUL3 147 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 IFI27P40305 119 aaPredicted RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 CKS1BP61024 79 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 TBR1Q16650 682 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ORMDL3Q8N138 153 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 PLA2G10O15496 165 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF79Q15937 498 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 PAPPA2Q9BXP8 1791 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 TRAV2A0A0B4J234 112 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 TRGV4A0A0C4DH28 118 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 GGTLC3B5MD39 225 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FOXA3P55318 350 aaPredicted RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FOXS1O43638 330 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 NANOS3P60323 173 aaKnown RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 CLEC19AQ6UXS0 136 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 SMIM8Q96KF7 97 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 IGKV1D-16P01601 117 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ST6GALNAC6Q969X2 333 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 JMJD8Q96S16 334 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 CST9LQ9H4G1 147 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 DPM3Q9P2X0 92 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 LINC00614P0C842 121 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 LIMS2Q7Z4I7 341 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 NIT1Q86X76 327 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FER1L6-AS1Q8NA97 138 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 PPP1R27Q86WC6 154 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 NRAPQ86VF7 1730 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNRF1Q8ND25 227 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 TMEM52Q8NDY8 209 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 TMEM91Q6ZNR0 172 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 YAE1D1Q9NRH1 226 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 CD8AP01732 235 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 SLC25A47Q6Q0C1 308 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FBXL15Q9H469 300 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 IL6RP08887 468 aaPredicted RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 S100A7L2Q5SY68 101 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 FMC1Q96HJ9 113 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 SRXN1Q9BYN0 137 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 DOCK3Q8IZD9 2030 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 TCRBV4S1A1TA0A5B7 111 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 PLNP26678 52 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 LEPP41159 167 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 OR9G4Q8NGQ1 327 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 GATAD1Q8WUU5 269 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 MYO5AQ9Y4I1 1855 aaKnown RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 DYSFO75923 2080 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF818PQ6ZRF7 136 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF703Q9H7S9 590 aaPredicted RBP4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 G6PC2Q9NQR9 355 aa4.92□□□□□ -1.62
SRGAP1-201ENST00000355086 NGFRP08138 427 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 TMEM54Q969K7 222 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM57AQ8TBR7 257 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 COQ2Q96H96 371 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 C7orf69Q9H7B7 122 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 ITGB4P16144 1822 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 TMEM167AQ8TBQ9 72 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 AQP3Q92482 292 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 C1QTNF12Q5T7M4 302 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 TM4SF5O14894 197 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 RPL39P5Q59GN2 51 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 FAM209BQ5JX69 171 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 CENPVL1A0A0U1RR11 272 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 C8orf46Q8TAG6 207 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 TIMM23BQ5SRD1 257 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 ZNF660Q6AZW8 331 aaPredicted RBP4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 RPP21Q9H633 154 aaKnown RBP4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 EDA2RQ9HAV5 297 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 GPR132Q9UNW8 380 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 DOCK5Q9H7D0 1870 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 PSCAO43653 123 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 DMRTA1Q5VZB9 504 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 RFLNBQ8N5W9 214 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 SLC22A18ASQ8N1D0 253 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 MRPS18AQ9NVS2 196 aaKnown RBP4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 SIGLEC1Q9BZZ2 1709 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 CRYBA2P53672 197 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 RIF1Q5UIP0 2472 aaKnown RBP4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 PCP4P48539 62 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 NSUN5P1Q3KNT7 163 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 PSMG4Q5JS54 123 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 JPT2Q9H910 190 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 IL36BQ9NZH7 164 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 CLDN16Q9Y5I7 305 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 RIPPLY2Q5TAB7 128 aa4.91□□□□□ -1.62
SRGAP1-201ENST00000355086 Q6AWC8 147 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms