RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RS1O15537 224 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 HLA-HP01893 362 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 RPL24P83731 157 aaKnown RBP9.06□□□□□ -0.96
SND1-201ENST00000354725 SLC25A40Q8TBP6 338 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 BAALCQ8WXS3 180 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 NPFFR1Q9GZQ6 430 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 ANKRD11Q6UB99 2663 aaPredicted RBP9.06□□□□□ -0.96
SND1-201ENST00000354725 DPRXA6NFQ7 191 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 C21orf140B9A014 251 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 MPPED1O15442 326 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 WIPF1O43516 503 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 GPX1P07203 203 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 WNT2P09544 360 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 LIFP15018 202 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 AADACP22760 399 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 OPRM1P35372 400 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 RBMXP38159 391 aaKnown RBP9.06□□□□□ -0.96
SND1-201ENST00000354725 RNPS1Q15287 305 aaKnown RBP9.06□□□□□ -0.96
SND1-201ENST00000354725 FAM27BQ5VT28 67 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
SND1-201ENST00000354725 MTCP1P56278 107 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 OR8B8Q15620 311 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 LRRC75A-AS1Q8N1F1 130 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 GALMQ96C23 342 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 SPATA25Q9BR10 227 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 MRPL16Q9NX20 251 aaKnown RBP9.05□□□□□ -0.96
SND1-201ENST00000354725 PIGLQ9Y2B2 252 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 KALRNO60229 2985 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 IGKV1-12A0A0C4DH73 117 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 ZFAND5O76080 213 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 IGKV1D-12P01611 117 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 FCGR2AP12318 317 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 MRPS34P82930 218 aaKnown RBP9.05□□□□□ -0.96
SND1-201ENST00000354725 RBPMS2Q6ZRY4 209 aaKnown RBP9.05□□□□□ -0.96
SND1-201ENST00000354725 CYP2G1PQ6ZSU1 146 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 NEUROG1Q92886 237 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
SND1-201ENST00000354725 NRN1Q9NPD7 142 aa9.05□□□□□ -0.96
SND1-201ENST00000354725 BCL2P10415 239 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 PPOXP50336 477 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 RPL23P62829 140 aaKnown RBP9.04□□□□□ -0.96
SND1-201ENST00000354725 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 ABHD14BQ96IU4 210 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 GPER1Q99527 375 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 FAM231BA6NCW3 169 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 RRADP55042 308 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 PCOLCEQ15113 449 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 H2BFWTQ7Z2G1 175 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 SPACA3Q8IXA5 215 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 SMIM7Q9BQ49 75 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 IGSF23A1L1A6 192 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 ZFP92A6NM28 416 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 ZIC3O60481 467 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 AGFG2O95081 481 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 CRISP2P16562 243 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 PRTN3P24158 256 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 LHX2P50458 406 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 RBM11P57052 281 aaKnown RBP9.04□□□□□ -0.96
SND1-201ENST00000354725 KHDC1LQ5JSQ8 128 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 BAGE2Q86Y30 109 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 PRORYQ9H606 182 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 POLR1DQ9Y2S0 133 aa9.04□□□□□ -0.96
SND1-201ENST00000354725 M0R135 149 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 CLDN17P56750 224 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 YPEL3P61236 119 aaPredicted RBP9.03□□□□□ -0.96
SND1-201ENST00000354725 PLP2Q04941 152 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 LCN15Q6UWW0 184 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 LYZL2Q7Z4W2 148 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 ZNF799Q96GE5 643 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 AGMATQ9BSE5 352 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 RAXQ9Y2V3 346 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 CAMPP49913 170 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 UCNP55089 124 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 RUNX1Q01196 453 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 RELBQ01201 579 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 RAX2Q96IS3 184 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 ANAPC13Q9BS18 74 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 BOKQ9UMX3 212 aaPredicted RBP9.03□□□□□ -0.96
SND1-201ENST00000354725 MBD3L4A6NDZ8 208 aaPredicted RBP9.03□□□□□ -0.96
SND1-201ENST00000354725 MBD3L3A6NE82 208 aaPredicted RBP9.03□□□□□ -0.96
SND1-201ENST00000354725 OOEPA6NGQ2 149 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 MBD3L5A6NJ08 208 aaPredicted RBP9.03□□□□□ -0.96
SND1-201ENST00000354725 LRRC3CA6NJW4 275 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 K7EP34 96 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 DHHO43323 396 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 CGAP01215 116 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 CELA3BP08861 270 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 NPY1RP25929 384 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 NTF4P34130 210 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 B3GALT5-AS1P59052 145 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 NRN1LQ496H8 165 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 ZNF611Q8N823 705 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 PLPPR1Q8TBJ4 325 aa9.03□□□□□ -0.96
SND1-201ENST00000354725 RTN4IP1Q8WWV3 396 aaPredicted RBP9.03□□□□□ -0.96
SND1-201ENST00000354725 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
SND1-201ENST00000354725 TRAV1-1A0A0B4J248 108 aa9.02□□□□□ -0.97
SND1-201ENST00000354725 STUMQ69YW2 141 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms