RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FAM3BP58499 235 aaPredicted RBP9.14□□□□□ -0.95
CLCN6-202ENST00000346436 CD69Q07108 199 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 PNRC1Q12796 327 aaPredicted RBP9.14□□□□□ -0.95
CLCN6-202ENST00000346436 TMEM177Q53S58 311 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 TMEM97Q5BJF2 176 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 FGFBP3Q8TAT2 258 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 FANCMQ8IYD8 2048 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 PGPA6NDG6 321 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 ERVK11-1P61568 191 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 WFDC1Q9HC57 220 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 CYTL1Q9NRR1 136 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 CXorf1O96002 111 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 TNFRSF14Q92956 283 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 WBP1Q96G27 269 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 LINC01587Q99440 93 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 NAT8BQ9UHF3 227 aa9.14□□□□□ -0.95
CLCN6-202ENST00000346436 J3QLI3 93 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 FCN1O00602 326 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 KLF7O75840 302 aaPredicted RBP9.13□□□□□ -0.95
CLCN6-202ENST00000346436 EGR1P18146 543 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 LYRM7Q5U5X0 104 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 ABLIM2Q6H8Q1 611 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 FGFRL1Q8N441 504 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 RBKSQ9H477 322 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 CRIM1Q9NZV1 1036 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 RIF1Q5UIP0 2472 aaKnown RBP9.13□□□□□ -0.95
CLCN6-202ENST00000346436 CEACAM4O75871 244 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 HINT1P49773 126 aaPredicted RBP9.13□□□□□ -0.95
CLCN6-202ENST00000346436 ZMAT4Q9H898 229 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 CEP250Q9BV73 2442 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 TMEM189A5PLL7 270 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 F8VVB4 439 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 F8VWA3 439 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 NPFFO15130 113 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 NBR2O15453 112 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 LINC00869P0C866 280 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 PAPPA-AS1Q5QFB9 102 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 SLX1AQ9BQ83 275 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 KIAA1671Q9BY89 1806 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 TRAV34A0A0B4J273 112 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 MINOS1Q5TGZ0 78 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 H1FOOQ8IZA3 346 aaPredicted RBP9.13□□□□□ -0.95
CLCN6-202ENST00000346436 C11orf44Q8N8P7 122 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 TMEM140Q9NV12 185 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 SPRR3Q9UBC9 169 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 MINOS1-NBL1R4GNA1 71 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 IGKV1D-13A0A0B4J2D9 117 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 FGF16O43320 207 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 PTBP3O95758 552 aaKnown RBP9.13□□□□□ -0.95
CLCN6-202ENST00000346436 IGKV1-13P0DP09 117 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 CRYGSP22914 178 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 Q0VFX4 171 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 FAM216BQ8N7L0 139 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 C21orf62Q9NYP8 219 aa9.13□□□□□ -0.95
CLCN6-202ENST00000346436 A0A0G2JNJ9 132 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 ISLRO14498 428 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 CRPP02741 224 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 TRGC1P0CF51 173 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 SCGB1C2P0DMR2 95 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 OR10J1P30954 320 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 CCL20P78556 96 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 RPRMQ9NS64 109 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 AP5S1Q9NUS5 200 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 Q9UFV3 132 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 GLIPR1P48060 266 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 VKORC1L1Q8N0U8 176 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 ARL2-SNX15V9GYD0 113 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 NCOR1O75376 2440 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 MBD3L4A6NDZ8 208 aaPredicted RBP9.12□□□□□ -0.95
CLCN6-202ENST00000346436 MBD3L3A6NE82 208 aaPredicted RBP9.12□□□□□ -0.95
CLCN6-202ENST00000346436 MBD3L5A6NJ08 208 aaPredicted RBP9.12□□□□□ -0.95
CLCN6-202ENST00000346436 EMP1P54849 157 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 MBD3L2Q8NHZ7 208 aaPredicted RBP9.12□□□□□ -0.95
CLCN6-202ENST00000346436 TMEM167AQ8TBQ9 72 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 LEAP2Q969E1 77 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 CXorf65A6NEN9 183 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 PRSS1P07477 247 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 CX3CL1P78423 397 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 ZNRF1Q8ND25 227 aa9.12□□□□□ -0.95
CLCN6-202ENST00000346436 ELOA3CA0A087WX78 387 aaPredicted RBP9.11□□□□□ -0.95
CLCN6-202ENST00000346436 IGKV1-12A0A0C4DH73 117 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 KBTBD11-OT1A0A1B0GTJ5 212 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 PSCAO43653 123 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 IGKV1D-12P01611 117 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 TFF1P04155 84 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 HSPB1P04792 205 aaKnown RBP9.11□□□□□ -0.95
CLCN6-202ENST00000346436 OR5AL1P0C617 328 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 ZNF146Q15072 292 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 MYOZ3Q8TDC0 251 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 C1QTNF4Q9BXJ3 329 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 IGKV1-27A0A075B6S5 117 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 B4DEV8 164 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 TAF15Q92804 592 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLCN6-202ENST00000346436 GPR82Q96P67 336 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 TMEM133Q9H2Q1 129 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 FBXL15Q9H469 300 aa9.11□□□□□ -0.95
CLCN6-202ENST00000346436 SPTBN2O15020 2390 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms