RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 ZNF788Q6ZQV5 615 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 FBLN5Q9UBX5 448 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 MPDZO75970 2070 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 hCG_38984A0A1B0GV85 526 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 TMEM238LA0A1B0GVL6 79 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 A6NJY4 79 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 K7ESF4 209 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 HIST1H1AQ02539 215 aaPredicted RBP13.11□□□□□ -0.31
SRPK1-201ENST00000346162 LINC00470Q9BZP3 86 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 AP5S1Q9NUS5 200 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 DOCK11Q5JSL3 2073 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 A0A0G2JMM0 328 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 A0A1W2PPB8 328 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 KIR3DP1A8MWS1 328 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 C17orf82Q86X59 251 aaPredicted RBP13.11□□□□□ -0.31
SRPK1-201ENST00000346162 VOPP1Q96AW1 172 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 TIMP4Q99727 224 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 SLC25A33Q9BSK2 321 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 TM2D1Q9BX74 207 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 ZNF703Q9H7S9 590 aaPredicted RBP13.11□□□□□ -0.31
SRPK1-201ENST00000346162 PRNDQ9UKY0 176 aa13.11□□□□□ -0.31
SRPK1-201ENST00000346162 DOCK8Q8NF50 2099 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 GBF1Q92538 1859 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 NAPSAO96009 420 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 TYMSP04818 313 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 CCL8P80075 99 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 OR1N2Q8NGR9 330 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 OR1L1Q8NH94 360 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 ST20Q9HBF5 79 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 PRR19A6NJB7 356 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 EMP1P54849 157 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 SEC11AP67812 179 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 HARBI1Q96MB7 349 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 MS4A5Q9H3V2 200 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 LOC102723996A0A087X1L8 192 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 SCO2A0A1W2PP80 73 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 CD55P08174 381 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 CA7P43166 264 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 FAM131CQ96AQ9 280 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 PGLYRP4Q96LB8 373 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 POLEQ07864 2286 aa13.1□□□□□ -0.31
SRPK1-201ENST00000346162 MPV17P39210 176 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 KLF14Q8TD94 323 aaPredicted RBP13.09□□□□□ -0.31
SRPK1-201ENST00000346162 KLHDC3Q9BQ90 382 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 OR2T8A6NH00 312 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 PI4KAP42356 2102 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 RAB1CQ92928 201 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 C10orf113Q5VZT2 155 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
SRPK1-201ENST00000346162 SPTAN1Q13813 2472 aaKnown RBP13.08□□□□□ -0.31
SRPK1-201ENST00000346162 IGLV3-32A0A0A0MS00 114 aa13.08□□□□□ -0.31
SRPK1-201ENST00000346162 TNXAQ16473 311 aa13.08□□□□□ -0.31
SRPK1-201ENST00000346162 TEX29Q8N6K0 151 aa13.08□□□□□ -0.31
SRPK1-201ENST00000346162 MBD3L1Q8WWY6 194 aa13.08□□□□□ -0.31
SRPK1-201ENST00000346162 ZG16O60844 167 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF883P0CG24 379 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.32
SRPK1-201ENST00000346162 A0A1B0GUS0 222 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 STPG4Q8N801 248 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 MRPS16Q9Y3D3 137 aaKnown RBP13.08□□□□□ -0.32
SRPK1-201ENST00000346162 J3QR06 171 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 UCP1P25874 307 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
SRPK1-201ENST00000346162 MYOZ3Q8TDC0 251 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 PERPQ96FX8 193 aa13.08□□□□□ -0.32
SRPK1-201ENST00000346162 NLRC5Q86WI3 1866 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 HYPMO75409 117 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 GCHFRP30047 84 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 PAQR4Q8N4S7 273 aaPredicted RBP13.07□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF418Q8TF45 676 aaPredicted RBP13.07□□□□□ -0.32
SRPK1-201ENST00000346162 RAB1BQ9H0U4 201 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 CCL13Q99616 98 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 MYLKQ15746 1914 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 TRAV1-1A0A0B4J248 108 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 MUC21A0A0G2JKD1 596 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 MUC21A0A140T8X8 626 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 IL4P05112 153 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 FOXL1Q12952 345 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 MUC21Q5SSG8 566 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 PAXXQ9BUH6 204 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 VSIRQ9H7M9 311 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF319Q9P2F9 582 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 TMSB15BA0A087X1C1 80 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 CEACAM3P40198 252 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 FAM90A2PQ658T7 463 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 ZNF645Q8N7E2 425 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 OR5P3Q8WZ94 311 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 FGF11Q92914 225 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 NPCDR1Q9BY65 106 aa13.07□□□□□ -0.32
SRPK1-201ENST00000346162 OR1B1Q8NGR6 318 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 PLSCR2Q9NRY7 297 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 AMMECR1Q9Y4X0 333 aaPredicted RBP13.06□□□□□ -0.32
SRPK1-201ENST00000346162 PPIAL4EA0A075B759 164 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 E9PQ18 207 aa13.06□□□□□ -0.32
SRPK1-201ENST00000346162 EFNA2O43921 213 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms