RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ARL3P36405 182 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 HAGHQ16775 308 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 GPR107Q5VW38 600 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 LCN12Q6JVE5 192 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 LHFPL1Q86WI0 220 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 COMMD5Q9GZQ3 224 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 MLXQ9UH92 298 aa12.83□□□□□ -0.36
BRCC3-202ENST00000340647 A8MWP6 167 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 TRAPPC2P0DI81 140 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 TRAPPC2BP0DI82 140 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 CBLN1P23435 193 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 RCVRNP35243 200 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 UCP3P55916 312 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 FAM209BQ5JX69 171 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 TBC1D26Q86UD7 250 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 GDPD1Q8N9F7 314 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 OR52I2Q8NH67 350 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 BORCS5Q969J3 196 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 EEF1AKMT3Q96AZ1 226 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 WDR89Q96FK6 387 aaPredicted RBP12.82□□□□□ -0.36
BRCC3-202ENST00000340647 SEC22AQ96IW7 307 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 EDA2RQ9HAV5 297 aa12.82□□□□□ -0.36
BRCC3-202ENST00000340647 TRBV7-1A0A0A6YYK4 115 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 RBMY1BA6NDE4 496 aaKnown RBP12.81□□□□□ -0.36
BRCC3-202ENST00000340647 RBMY1EA6NEQ0 496 aaKnown RBP12.81□□□□□ -0.36
BRCC3-202ENST00000340647 RBMY1DP0C7P1 496 aaKnown RBP12.81□□□□□ -0.36
BRCC3-202ENST00000340647 C8orf88P0DMB2 117 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 OR13C7P0DN81 318 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 DEFA4P12838 97 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
BRCC3-202ENST00000340647 PTBP1P26599 531 aaKnown RBP eCLIP12.81□□□□□ -0.36
BRCC3-202ENST00000340647 SPCS2Q15005 226 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 TM4SF20Q53R12 229 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 RNASE12Q5GAN4 147 aaKnown RBP12.81□□□□□ -0.36
BRCC3-202ENST00000340647 SGPP2Q8IWX5 399 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 OR4D10Q8NGI6 311 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 MRGPRFQ96AM1 343 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 TMEM14BQ9NUH8 114 aa12.81□□□□□ -0.36
BRCC3-202ENST00000340647 IGHV3-35A0A0C4DH35 117 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 SMIM31A0A1B0GVY4 71 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 DHFRP00374 187 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 GPR183P32249 361 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 CASC10Q5T4H9 136 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 CMTM1Q8IZ96 169 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 MUC7Q8TAX7 377 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 CXorf58Q96LI9 332 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 NEURL2Q9BR09 285 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-202ENST00000340647 PLEKHA3Q9HB20 300 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 FAM212BQ9NTI7 297 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-202ENST00000340647 MTFP1Q9UDX5 166 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 OR51B2Q9Y5P1 312 aa12.8□□□□□ -0.36
BRCC3-202ENST00000340647 F11RQ9Y624 299 aaKnown RBP12.8□□□□□ -0.36
BRCC3-202ENST00000340647 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 IGHV3-21A0A0B4J1V1 117 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 K7EIM0 57 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 P0C879 139 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 PI3P19957 117 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 ADMP35318 185 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 CD81P60033 236 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 TSPAN5P62079 268 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 DEFB125Q8N687 156 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 UXS1Q8NBZ7 420 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 VN1R17PQ8TDU5 208 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 CHRDL1Q9BU40 450 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 EXTL2Q9UBQ6 330 aa12.79□□□□□ -0.36
BRCC3-202ENST00000340647 C15orf61A6NNL5 157 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 FAM25AB3EWG3 89 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 FAM25CB3EWG5 89 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 FAM25GB3EWG6 89 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 CTDSP2O14595 271 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 CD3DP04234 171 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 ERVK-16P61578 105 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 THOC7Q6I9Y2 204 aaKnown RBP12.78□□□□□ -0.36
BRCC3-202ENST00000340647 LAX1Q8IWV1 398 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 SLC38A6Q8IZM9 456 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 SCARB1Q8WTV0 552 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 RETNQ9HD89 108 aa12.78□□□□□ -0.36
BRCC3-202ENST00000340647 TECRQ9NZ01 308 aaKnown RBP12.78□□□□□ -0.36
BRCC3-202ENST00000340647 ZNF320A2RRD8 509 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 TGOLN2O43493 480 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 IGKV1-5P01602 117 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 CD74P04233 296 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 RND3P61587 244 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 MZT2AQ6P582 158 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 HSD17B13Q7Z5P4 300 aaPredicted RBP12.77□□□□□ -0.37
BRCC3-202ENST00000340647 GTSCR1Q86UQ5 136 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 DYNLRB2Q8TF09 96 aa12.77□□□□□ -0.37
BRCC3-202ENST00000340647 LSM10Q969L4 123 aaKnown RBP12.77□□□□□ -0.37
BRCC3-202ENST00000340647 HINT2Q9BX68 163 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms