RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 IL1F10Q8WWZ1 152 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 NEIL1Q96FI4 390 aaPredicted RBP10.54□□□□□ -0.72
DFFB-202ENST00000339350 VCX2Q9H322 139 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 hCG_38984A0A1B0GV85 526 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 MDFIC2A0A1B0GVS7 189 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 H3BUT2 72 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 IGKV1D-33P01593 117 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 IGKV1-33P01594 117 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 CELA3AP09093 270 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 SSTR5P35346 364 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 UQCRFS1P47985 274 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 SRYQ05066 204 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 ZNF324BQ6AW86 544 aaPredicted RBP10.54□□□□□ -0.72
DFFB-202ENST00000339350 ZNF562Q6V9R5 426 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 OR10X1Q8NGY0 326 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 SLC22A20A6NK97 555 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 SMIM17P0DL12 118 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 ABHD17BQ5VST6 288 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 FOXL2NBQ6ZUU3 175 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 RPP25LQ8N5L8 163 aaKnown RBP10.53□□□□□ -0.72
DFFB-202ENST00000339350 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 RDH5Q92781 318 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 NINJ1Q92982 152 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 OR2H1Q9GZK4 316 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 GP6Q9HCN6 339 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 MED12LQ86YW9 2145 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 K7EP34 96 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 SLC17A3O00476 420 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 SSR4P51571 173 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 NRN1LQ496H8 165 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 C20orf204Q6ZNR8 217 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 CLDN23Q96B33 292 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 C10orf35Q96D05 121 aa10.53□□□□□ -0.72
DFFB-202ENST00000339350 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
DFFB-202ENST00000339350 TNRC6AQ8NDV7 1962 aaKnown RBP10.53□□□□□ -0.72
DFFB-202ENST00000339350 IGKV1-6A0A0C4DH72 117 aa10.52□□□□□ -0.72
DFFB-202ENST00000339350 hDV102S1A0JD36 115 aa10.52□□□□□ -0.72
DFFB-202ENST00000339350 CFHR2P36980 270 aa10.52□□□□□ -0.72
DFFB-202ENST00000339350 FOXG1P55316 489 aaPredicted RBP10.52□□□□□ -0.72
DFFB-202ENST00000339350 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.72
DFFB-202ENST00000339350 SPATA12Q7Z6I5 190 aa10.52□□□□□ -0.72
DFFB-202ENST00000339350 NAT8BQ9UHF3 227 aa10.52□□□□□ -0.72
DFFB-202ENST00000339350 ATMQ13315 3056 aa10.52□□□□□ -0.72
DFFB-202ENST00000339350 MED13Q9UHV7 2174 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 IGHV1-45A0A0A0MS14 117 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 LRP5LA4QPB2 252 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 PAX9P55771 341 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 TMPRSS3P57727 454 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 SLC25A34Q6PIV7 304 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.52□□□□□ -0.73
DFFB-202ENST00000339350 RPS19BP1Q86WX3 136 aaKnown RBP10.52□□□□□ -0.73
DFFB-202ENST00000339350 SMG1Q96Q15 3661 aaKnown RBP10.52□□□□□ -0.73
DFFB-202ENST00000339350 VDAC1P21796 283 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 FABP6P51161 128 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 RPS16P62249 146 aaKnown RBP10.52□□□□□ -0.73
DFFB-202ENST00000339350 OR2K2Q8NGT1 345 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
DFFB-202ENST00000339350 ZNF816-ZNF321PA0A0X1KG74 233 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 F2RL2O00254 374 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 SYNGR1O43759 233 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 NAPSAO96009 420 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 PSG2P11465 335 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 COX6A1P12074 109 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 GPR12P47775 334 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 RNFT1Q5M7Z0 435 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 TMEM42Q69YG0 159 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 TMEM211Q6ICI0 200 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 Q6ZSR3 168 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 OR10D3Q8NH80 312 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 JKAMPQ9P055 326 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 PRR14LQ5THK1 2151 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 SAA2-SAA4A0A096LPE2 208 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 NDUFB4O95168 129 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 ADH4P08319 380 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 SRIP30626 198 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 SRD5A2P31213 254 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 RHOBP62745 196 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 EIF3IQ13347 325 aaKnown RBP10.51□□□□□ -0.73
DFFB-202ENST00000339350 ACSF3Q4G176 576 aaPredicted RBP10.51□□□□□ -0.73
DFFB-202ENST00000339350 PMS2CLQ68D20 193 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 PET117Q6UWS5 81 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 ASCL4Q6XD76 172 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 Q6ZRM9 215 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 OR5A2Q8NGI9 324 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 WDR54Q9H977 334 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 ST20Q9HBF5 79 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 SERTAD4Q9NUC0 356 aa10.51□□□□□ -0.73
DFFB-202ENST00000339350 C11orf94C9JXX5 98 aa10.5□□□□□ -0.73
DFFB-202ENST00000339350 SLC25A6P12236 298 aa10.5□□□□□ -0.73
DFFB-202ENST00000339350 GAGE5Q13069 117 aa10.5□□□□□ -0.73
DFFB-202ENST00000339350 GAGE6Q13070 117 aa10.5□□□□□ -0.73
DFFB-202ENST00000339350 FOXE3Q13461 319 aa10.5□□□□□ -0.73
DFFB-202ENST00000339350 NMSQ5H8A3 153 aa10.5□□□□□ -0.73
DFFB-202ENST00000339350 SRSF8Q9BRL6 282 aaKnown RBP10.5□□□□□ -0.73
DFFB-202ENST00000339350 QTRT1Q9BXR0 403 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms