RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GOSR1O95249 250 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 CXorf1O96002 111 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 GCGP01275 180 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 OR9G9P0C7N8 305 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 AREGP15514 252 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 SSTR5P35346 364 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 CEBPDP49716 269 aaPredicted RBP8.87□□□□□ -0.99
RTN3-201ENST00000338850 PKIAP61925 76 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 RELBQ01201 579 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 JOSD1Q15040 202 aaPredicted RBP8.87□□□□□ -0.99
RTN3-201ENST00000338850 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
RTN3-201ENST00000338850 FAM209BQ5JX69 171 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 PRAMEF5Q5TYX0 476 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 PRAMEF6Q5VXH4 476 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 ZNF826PQ6ZT77 177 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 SSX8Q7RTT4 187 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 PNKDQ8N490 385 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 OR10D4PQ8NGN7 298 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 OR1P1Q8NH06 330 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 OR4F5Q8NH21 305 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 SDSLQ96GA7 329 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 OR4F4Q96R69 305 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 HIST1H2BLQ99880 126 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 SLC25A10Q9UBX3 287 aaPredicted RBP8.87□□□□□ -0.99
RTN3-201ENST00000338850 PSG11Q9UQ72 335 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 ZNF257Q9Y2Q1 563 aa8.87□□□□□ -0.99
RTN3-201ENST00000338850 IGKV1D-17A0A075B6S4 117 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 A8MXE2 369 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 C9JCJ5 164 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 INS-IGF2F8WCM5 200 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 ST8SIA5O15466 376 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 PROP1O75360 226 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 MT-CO2P00403 227 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 IL6RP08887 468 aaPredicted RBP8.86□□□□□ -0.99
RTN3-201ENST00000338850 VWA1Q6PCB0 445 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 LINC01551Q86U37 167 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 OR2T10Q8NGZ9 312 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 OR4A16Q8NH70 328 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 Q8TCH9 128 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 STARD4Q96DR4 205 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 PACRGQ96M98 296 aaPredicted RBP8.86□□□□□ -0.99
RTN3-201ENST00000338850 GGTLC1Q9BX51 225 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 QTRT1Q9BXR0 403 aaKnown RBP8.86□□□□□ -0.99
RTN3-201ENST00000338850 GPR61Q9BZJ8 451 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 ZFHX3Q15911 3703 aa8.86□□□□□ -0.99
RTN3-201ENST00000338850 TET2Q6N021 2002 aaPredicted RBP8.85□□□□□ -0.99
RTN3-201ENST00000338850 NIPBLQ6KC79 2804 aaeCLIP8.85□□□□□ -0.99
RTN3-201ENST00000338850 A0A1W2PPR1 153 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 TSTD3H0UI37 97 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 PAGE4O60829 102 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 CD55P08174 381 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 CCKARP32238 428 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 RPL29P47914 159 aaKnown RBP8.85□□□□□ -0.99
RTN3-201ENST00000338850 RTL8BQ17RB0 113 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 CXorf67Q86X51 503 aaPredicted RBP8.85□□□□□ -0.99
RTN3-201ENST00000338850 CNEP1R1Q8N9A8 125 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 UBALD1Q8TB05 177 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 RPUSD4Q96CM3 377 aaKnown RBP8.85□□□□□ -0.99
RTN3-201ENST00000338850 MEGF10Q96KG7 1140 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 S1PR3Q99500 378 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 C19orf24Q9BVV8 132 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 TMEM14BQ9NUH8 114 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 CALYQ9NYX4 217 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 GNG12Q9UBI6 72 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 TCF19Q9Y242 345 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 NAV3Q8IVL0 2385 aa8.85□□□□□ -0.99
RTN3-201ENST00000338850 DOCK11Q5JSL3 2073 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 A0A1W2PPV4 95 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 C3orf80F5H4A9 247 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 M0R1X1 148 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 FCGR3BO75015 233 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 RBMXL2O75526 392 aaKnown RBP8.84□□□□□ -0.99
RTN3-201ENST00000338850 EGR1P18146 543 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 HSPE1P61604 102 aaKnown RBP8.84□□□□□ -0.99
RTN3-201ENST00000338850 RHOBP62745 196 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 RAB31Q13636 194 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 HNF4GQ14541 408 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 COX19Q49B96 90 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 FAM71F2Q6NXP2 309 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 BTNL3Q6UXE8 466 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 ZNF383Q8NA42 475 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 ZNF439Q8NDP4 499 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 NEUROG1Q92886 237 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 NOL4LQ96MY1 436 aaPredicted RBP8.84□□□□□ -0.99
RTN3-201ENST00000338850 MGST2Q99735 147 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 OPN3Q9H1Y3 402 aaPredicted RBP8.84□□□□□ -0.99
RTN3-201ENST00000338850 TMEM140Q9NV12 185 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 PXMP4Q9Y6I8 212 aa8.84□□□□□ -0.99
RTN3-201ENST00000338850 TRAV20A0A0B4J274 112 aa8.83□□□□□ -1
RTN3-201ENST00000338850 KBTBD11-OT1A0A1B0GTJ5 212 aa8.83□□□□□ -1
RTN3-201ENST00000338850 AMBPP02760 352 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms