RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
PRKN-201ENST00000338468 S100GP29377 79 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 PIGPP57054 158 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 SYNJ2BPP57105 145 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 WT1-ASQ06250 92 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 SCGB2B2Q4G0G5 96 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 HAPLN4Q86UW8 402 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 OR4C16Q8NGL9 310 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 MARCH1Q8TCQ1 289 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 CCDC140Q96MF4 163 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 TP53RKQ96S44 253 aa11.65□□□□□ -0.54
PRKN-201ENST00000338468 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
PRKN-201ENST00000338468 ANKRD20A5PA0PJZ0 165 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 PPP5D1E7EU14 171 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 H0Y980 276 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 SPNP16150 400 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 MEF2DQ14814 521 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 OR9G4Q8NGQ1 327 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 OR1L8Q8NGR8 309 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 TMEM14BQ9NUH8 114 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 RSL24D1Q9UHA3 163 aaKnown RBP11.64□□□□□ -0.55
PRKN-201ENST00000338468 OR51B2Q9Y5P1 312 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 S4R3C0 116 aa11.64□□□□□ -0.55
PRKN-201ENST00000338468 SORL1Q92673 2214 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 FABP12A6NFH5 140 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 MFSD2BA6NFX1 497 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 CCDC160A6NGH7 325 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 C15orf61A6NNL5 157 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 IGKV1-5P01602 117 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 CTSDP07339 412 aaPredicted RBP11.63□□□□□ -0.55
PRKN-201ENST00000338468 P0C879 139 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 AKAIN1P0CW23 69 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 OR13C7P0DN81 318 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 HIST1H1BP16401 226 aaKnown RBP11.63□□□□□ -0.55
PRKN-201ENST00000338468 MFAP2P55001 183 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 RPEL1Q2QD12 228 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 THOC7Q6I9Y2 204 aaKnown RBP11.63□□□□□ -0.55
PRKN-201ENST00000338468 ZFAND1Q8TCF1 268 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 OR4C12Q96R67 309 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 B9D2Q9BPU9 175 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 RTBDNQ9BSG5 229 aaPredicted RBP11.63□□□□□ -0.55
PRKN-201ENST00000338468 PRNDQ9UKY0 176 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 V9GYH0 126 aa11.63□□□□□ -0.55
PRKN-201ENST00000338468 C3orf85A0A1B0GTC6 90 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 ZNF701M0R085 212 aaPredicted RBP11.62□□□□□ -0.55
PRKN-201ENST00000338468 SNAPC5O75971 98 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 DHFRP00374 187 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 IGLV1-51P01701 117 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 HLA-AP01891 365 aaKnown RBP11.62□□□□□ -0.55
PRKN-201ENST00000338468 SERPINE2P07093 398 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 CSN3P07498 182 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 DEFA4P12838 97 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 IZUMO4Q1ZYL8 232 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 SP6Q3SY56 376 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 GDPD1Q8N9F7 314 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 ELOVL1Q9BW60 279 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 C5orf66Q9H5L9 145 aa11.62□□□□□ -0.55
PRKN-201ENST00000338468 DISC1C4P0D8 188 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 DCTN2Q13561 401 aaKnown RBP11.61□□□□□ -0.55
PRKN-201ENST00000338468 ZNF79Q15937 498 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 CLEC19AQ6UXS0 136 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 H2BFWTQ7Z2G1 175 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 HSD17B13Q7Z5P4 300 aaPredicted RBP11.61□□□□□ -0.55
PRKN-201ENST00000338468 OR51S1Q8NGJ8 323 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 OR6Q1Q8NGQ2 317 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 LSM10Q969L4 123 aaKnown RBP11.61□□□□□ -0.55
PRKN-201ENST00000338468 TRIM63Q969Q1 353 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 TSC22D3Q99576 134 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 HINT2Q9BX68 163 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 SLC2A8Q9NY64 477 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 COPZ2Q9P299 210 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 GPR132Q9UNW8 380 aa11.61□□□□□ -0.55
PRKN-201ENST00000338468 GGCTO75223 188 aaKnown RBP11.6□□□□□ -0.55
PRKN-201ENST00000338468 OR2C1O95371 312 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 LY86O95711 162 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 GP9P14770 177 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 UCP1P25874 307 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 MECP2P51608 486 aaKnown RBP11.6□□□□□ -0.55
PRKN-201ENST00000338468 SURF2Q15527 256 aaPredicted RBP11.6□□□□□ -0.55
PRKN-201ENST00000338468 FAM209BQ5JX69 171 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 CCDC190Q86UF4 302 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 CCDC71LQ8N9Z2 235 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 ZNF502Q8TBZ5 544 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 THAP7Q9BT49 309 aaPredicted RBP11.6□□□□□ -0.55
PRKN-201ENST00000338468 FKBP11Q9NYL4 201 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 SIGLEC8Q9NYZ4 499 aa11.6□□□□□ -0.55
PRKN-201ENST00000338468 F11RQ9Y624 299 aaKnown RBP11.6□□□□□ -0.55
PRKN-201ENST00000338468 A0A0B4J293 547 aa11.59□□□□□ -0.55
PRKN-201ENST00000338468 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
PRKN-201ENST00000338468 EDN2P20800 178 aa11.59□□□□□ -0.55
PRKN-201ENST00000338468 KLF9Q13886 244 aaPredicted RBP11.59□□□□□ -0.55
PRKN-201ENST00000338468 TATDN3Q17R31 274 aa11.59□□□□□ -0.55
PRKN-201ENST00000338468 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
PRKN-201ENST00000338468 LHFPL5Q8TAF8 219 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms