RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PAXXQ9BUH6 204 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 RPUSD1Q9UJJ7 312 aaKnown RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 HELTA6NFD8 242 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 MDKP21741 143 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 SSC4DQ8WTU2 575 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 PARLQ9H300 379 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 AAMDCQ9H7C9 122 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 SAA2-SAA4A0A096LPE2 208 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 LYNX1G3V0Z9 82 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 SAA2P0DJI9 122 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 LYNX1P0DP58 116 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 EGR1P18146 543 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 ATP5IP56385 69 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 C16orf82Q7Z2V1 217 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 DNASE2O00115 360 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 CAMPP49913 170 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 PPOXP50336 477 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 FAM3BP58499 235 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 CCL20P78556 96 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 STXBP6Q8NFX7 210 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 FUT9Q9Y231 359 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 TNFSF13O75888 250 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 NTF3P20783 257 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 NMSQ5H8A3 153 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 MBNL3Q9NUK0 354 aaKnown RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 SERTM2A0A1B0GWG4 89 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 KIAA1324LA8MWY0 1029 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-202ENST00000338368 SMIM17P0DL12 118 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 SEC14L6B5MCN3 397 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 MEOX2P50222 304 aa5.24□□□□□ -1.57
PRKDC-202ENST00000338368 CXorf65A6NEN9 183 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 HLA-DRB5Q30154 266 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 EXPH5Q8NEV8 1989 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 IGKV1D-17A0A075B6S4 117 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 SIGLECL1Q8N7X8 197 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 GGACTQ9BVM4 153 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 DNAJC4Q9NNZ3 241 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 OR9G9P0C7N8 305 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 SAA1P0DJI8 122 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-202ENST00000338368 CRISP2P16562 243 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF585BQ52M93 769 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 ZCCHC14Q8WYQ9 949 aaKnown RBP5.23□□□□□ -1.57
PRKDC-202ENST00000338368 F2RL2O00254 374 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 UPK2O00526 184 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 DSCR9P59020 149 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 ERVK11-1P61568 191 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 COPS9Q8WXC6 57 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 SDF2L1Q9HCN8 221 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 A0A0G2JNJ9 132 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 CD55P08174 381 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 LINC00205P59089 165 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 Q6ZRM9 215 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF586Q9NXT0 402 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 Q9UFV3 132 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 IL6RP08887 468 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF705AQ6ZN79 300 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-202ENST00000338368 NPCDR1Q9BY65 106 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 REG4Q9BYZ8 158 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 LOC105371242A0A075B767 164 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 LYL1P12980 280 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 CEACAM8P31997 349 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-202ENST00000338368 TFF3Q07654 80 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 C19orf24Q9BVV8 132 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 ACACBO00763 2458 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 TRBV23-1A0A0A0MS06 115 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 PGPA6NDG6 321 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 IGHV3-48P01763 117 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 CD5P06127 495 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 WDR83OSQ9Y284 106 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF253O75346 499 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 PLAUP00749 431 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 TRGC2P03986 189 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 OR8I2Q8N0Y5 310 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 Q8NFD4 153 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 MRPL20Q9BYC9 149 aaKnown RBP5.23□□□□□ -1.57
PRKDC-202ENST00000338368 OR51M1Q9H341 326 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 RD3LP0DJH9 198 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 KLHDC1Q8N7A1 406 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 SGMS2Q8NHU3 365 aa5.23□□□□□ -1.57
PRKDC-202ENST00000338368 LMO1P25800 156 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF343Q6P1L6 599 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 DPM3Q9P2X0 92 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 HYPMO75409 117 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 CRYBB3P26998 211 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 SMUG1Q53HV7 270 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 ZNF788Q6ZQV5 615 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 VSIRQ9H7M9 311 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 RFNGQ9Y644 331 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM250H0YL14 139 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 WDR86Q86TI4 376 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 NEU4Q8WWR8 484 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-202ENST00000338368 IFI27L2Q9H2X8 130 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 NAV3Q8IVL0 2385 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 REG1AP05451 166 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 IGFBP2P18065 325 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 TMEM183BQ1AE95 376 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 COX19Q49B96 90 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 DPRXA6NFQ7 191 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 C15orf61A6NNL5 157 aa5.22□□□□□ -1.57
PRKDC-202ENST00000338368 ID1P41134 155 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms