RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 FAM24AA6NFZ4 105 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 J3QLI3 93 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 EGR2P11161 476 aaPredicted RBP4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 FAM74A3Q4VXF1 159 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 SLC25A24Q6NUK1 477 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 ALKAL2Q6UX46 152 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 C16orf82Q7Z2V1 217 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 OR13D1Q8NGV5 346 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TBX15Q96SF7 602 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 IMMP2LQ96T52 175 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 TXN2Q99757 166 aa4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 MRPL20Q9BYC9 149 aaKnown RBP4.29□□□□□ -1.72
PRPF4B-201ENST00000337659 CXorf65A6NEN9 183 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM250H0YL14 139 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 H3BUA1 57 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SSSCA1O60232 199 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 IGKV1D-33P01593 117 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 IGKV1-33P01594 117 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 HLA-DRB1P01911 266 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SAA1P0DJI8 122 aaPredicted RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 G6PCP35575 357 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 PRRX1P54821 245 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 PRSS8Q16651 343 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SSX7Q7RTT5 188 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 Q8N2B8 174 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 ZCCHC24Q8N2G6 241 aaKnown RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 OR5C1Q8NGR4 320 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 LINC01560Q8TB33 94 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 MYOZ3Q8TDC0 251 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 CA5BP1Q8WTZ4 195 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 TRGV9Q99603 122 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 MGST2Q99735 147 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 GGTLC1Q9BX51 225 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 MANBALQ9NQG1 85 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM14CQ9P0S9 112 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 C13orf42A0A1B0GVH6 325 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 ZNF785A8K8V0 405 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 B4DEV8 164 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SRP19P09132 144 aaKnown RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 STAG3L2P0CL84 134 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 STAG3L3P0CL85 134 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 CD99P14209 185 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 GNLYP22749 145 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 GPR6P46095 362 aaPredicted RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 STX12Q86Y82 276 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 WIPF2Q8TF74 440 aaPredicted RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SH3BGRL3Q9H299 93 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 UFSP2Q9NUQ7 469 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 A6NLC8 198 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 C9JQL5 133 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 I3L2K1 104 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 CORTO00230 105 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 ENSAO43768 121 aaKnown RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 OR10J4P0C629 311 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 RAB14P61106 215 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 CCL8P80075 99 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 LOXL1Q08397 574 aaPredicted RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 PSG5Q15238 335 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 RHEBQ15382 184 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 OR1P1Q8NH06 330 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 TCTEX1D2Q8WW35 142 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 RNF2Q99496 336 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SSBP3Q9BWW4 388 aaPredicted RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM160Q9NX00 188 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SIGLEC9Q9Y336 463 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 F8W735 103 aaPredicted RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 VENTXO95231 258 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 IGKV1-16P04430 117 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 OMGP23515 440 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 PSMB3P49720 205 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 CD69Q07108 199 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SLC38A11Q08AI6 406 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 RNF212Q495C1 297 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 FAM201AQ5SY85 155 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 ASPHD1Q5U4P2 390 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 ACSM6Q6P461 480 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 H2BFWTQ7Z2G1 175 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 SLC35E3Q7Z769 313 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 PIFOQ8TCI5 191 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 ZNF471Q9BX82 626 aaPredicted RBP4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 MAGT1Q9H0U3 335 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 PPP1R14DQ9NXH3 145 aa4.28□□□□□ -1.72
PRPF4B-201ENST00000337659 CTXND1A0A1B0GTU2 59 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 WI2-2373I1.2A0A1W2PRP0 233 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 J3KRW8 73 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 HSPB6O14558 160 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 TMEM11P17152 192 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 UQCRFS1P47985 274 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 GATD1Q8NB37 220 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 CHTOPQ9Y3Y2 248 aaKnown RBP4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 RNASEK-C17orf49H0YIS7 233 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 SLC25A16P16260 332 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 ZFP36P26651 326 aaKnown RBP4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 ABHD12Q8N2K0 398 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 RPP25LQ8N5L8 163 aaKnown RBP4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 TRAV3A0A0B4J244 114 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms