RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 LINC01551Q86U37 167 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 PACRGQ96M98 296 aaPredicted RBP12.15□□□□□ -0.46
UBA1-201ENST00000335972 SLC35D1Q9NTN3 355 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 XKRY2A2RUG3 117 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 J3QR06 171 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 NDUFS6O75380 124 aaKnown RBP12.15□□□□□ -0.46
UBA1-201ENST00000335972 IGHV2-70P01814 119 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 CFHR2P36980 270 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 BSPH1Q075Z2 132 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 LHFPL4Q7Z7J7 247 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 HIST1H2BLQ99880 126 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 COL6A6A6NMZ7 2263 aa12.15□□□□□ -0.46
UBA1-201ENST00000335972 FCN3O75636 299 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 HRASP01112 189 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 CHRNB4P30926 498 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 HSPE1P61604 102 aaKnown RBP12.14□□□□□ -0.47
UBA1-201ENST00000335972 RPP30P78346 268 aaKnown RBP12.14□□□□□ -0.47
UBA1-201ENST00000335972 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 LYPD2Q6UXB3 125 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 DOLPP1Q86YN1 238 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 OR2T10Q8NGZ9 312 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
UBA1-201ENST00000335972 PTPRQQ9UMZ3 2332 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 PFDN5Q99471 154 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 SLC17A3O00476 420 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 OR10J4P0C629 311 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 OPRK1P41145 380 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 EFNB3Q15768 340 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
UBA1-201ENST00000335972 RAB7AP51149 207 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 CR1LQ2VPA4 569 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 IGHV3-72A0A0B4J1Y9 119 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 E7EUB6 86 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 TNFSF4P23510 183 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 RPL31P62899 125 aaKnown RBP12.13□□□□□ -0.47
UBA1-201ENST00000335972 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 SLC25A10Q9UBX3 287 aaPredicted RBP12.13□□□□□ -0.47
UBA1-201ENST00000335972 SPINK4O60575 86 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 TIMP3P35625 211 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 MALRD1Q5VYJ5 2156 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 UNQ6494/PRO21346Q6UXR6 183 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 FAM169BQ8N8A8 192 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 PLEKHA3Q9HB20 300 aa12.13□□□□□ -0.47
UBA1-201ENST00000335972 IGKV1OR2-108A0A075B7D4 117 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 FRMD6-AS1P0C7T7 363 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 STAG3L2P0CL84 134 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 STAG3L3P0CL85 134 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 OR5I1Q13606 314 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 HLA-DRB5Q30154 266 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 ZNF439Q8NDP4 499 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 OCC1Q8TAD7 63 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 SFXN3Q9BWM7 321 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 TMEM14BQ9NUH8 114 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
UBA1-201ENST00000335972 IL3RAP26951 378 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 GCHFRP30047 84 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 PAX5Q02548 391 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 ZNF600Q6ZNG1 722 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 CEACAM8P31997 349 aaPredicted RBP12.12□□□□□ -0.47
UBA1-201ENST00000335972 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
UBA1-201ENST00000335972 F6UZH7 168 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 C16orf97H3BN30 126 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 CRYABP02511 175 aaKnown RBP12.11□□□□□ -0.47
UBA1-201ENST00000335972 REG1AP05451 166 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 LGALS4P56470 323 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 C19orf35Q6ZS72 473 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 OR2T6Q8NHC8 308 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 DIRC2Q96SL1 478 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 LYNX1G3V0Z9 82 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 LYNX1P0DP58 116 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 OR10J1P30954 320 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 SSBP2P81877 361 aaPredicted RBP12.11□□□□□ -0.47
UBA1-201ENST00000335972 PSG5Q15238 335 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 TMEM108Q6UXF1 575 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 OR52E5Q8NH55 327 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 IMMP2LQ96T52 175 aa12.11□□□□□ -0.47
UBA1-201ENST00000335972 RPUSD1Q9UJJ7 312 aaKnown RBP12.11□□□□□ -0.47
UBA1-201ENST00000335972 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
UBA1-201ENST00000335972 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
UBA1-201ENST00000335972 CXorf1O96002 111 aa12.1□□□□□ -0.47
UBA1-201ENST00000335972 AMBPP02760 352 aa12.1□□□□□ -0.47
UBA1-201ENST00000335972 THBDP07204 575 aa12.1□□□□□ -0.47
UBA1-201ENST00000335972 GATA4P43694 442 aa12.1□□□□□ -0.47
UBA1-201ENST00000335972 GFRALQ6UXV0 394 aa12.1□□□□□ -0.47
UBA1-201ENST00000335972 HARBI1Q96MB7 349 aa12.1□□□□□ -0.47
UBA1-201ENST00000335972 ZNF705GA8MUZ8 300 aaPredicted RBP12.1□□□□□ -0.47
UBA1-201ENST00000335972 PRRG2O14669 202 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms