RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 MRAPQ8TCY5 172 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 PAPPAQ13219 1627 aa5.32□□□□□ -1.56
CSMD1-201ENST00000335551 EGR1P18146 543 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 GFERP55789 205 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 TRA2AQ13595 282 aaKnown RBP eCLIP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 DEFB109BQ30KR1 87 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 WFDC5Q8TCV5 224 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 C6orf106Q9H6K1 298 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 EPDR1Q9UM22 224 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 KLF12Q9Y4X4 402 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 SHISA8B8ZZ34 492 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 CDK2AP2O75956 126 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 CEACAM21Q3KPI0 293 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM86BQ8N661 226 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 FBLIM1Q8WUP2 373 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 MRPS18BQ9Y676 258 aaKnown RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 PPIAL4EA0A075B759 164 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 PPIAL4FP0DN26 164 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 PPIAL4AQ9Y536 164 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 LHX8Q68G74 356 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 WNT2BQ93097 391 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF488Q96MN9 340 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 PLAUP00749 431 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 HBDP02042 147 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 IFITM3Q01628 133 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 FAM106AQ4KMX7 169 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 FAM159AQ6UWV7 190 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 A0A1W2PPC1 479 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 DLEU1O43261 78 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 IFI27P40305 119 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H4AP62805 103 aaKnown RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 ORMDL2Q53FV1 153 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 GATAD1Q8WUU5 269 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 MFRPQ9BY79 579 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 TECTAO75443 2155 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 CCL2P13500 99 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 FGF12P61328 243 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 SELENOHQ8IZQ5 122 aaKnown RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF48Q96MX3 618 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 HS3ST3B1Q9Y662 390 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 PLAURQ03405 335 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 C1orf185Q5T7R7 199 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 VKORC1Q9BQB6 163 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 GNB1LQ9BYB4 327 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 DCAF10Q5QP82 559 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 MORN3Q6PF18 240 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 PHF7Q9BWX1 381 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-201ENST00000335551 PRDM14Q9GZV8 571 aa5.31□□□□□ -1.56
CSMD1-201ENST00000335551 A0A1W2PRD5 423 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 A0A1W2PRF3 423 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 A0A1W2PRM7 423 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 IFNL4K9M1U5 179 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 SNRPCP09234 159 aaKnown RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 PRSS12P56730 875 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 HSPE1P61604 102 aaKnown RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 WIPI1Q5MNZ9 446 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 Q6ZNB5 142 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 SAXO1Q8IYX7 474 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 TDHQ8IZJ6 230 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 MRPL20Q9BYC9 149 aaKnown RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 IGKV3D-11A0A0A0MRZ8 115 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 TRBV5-5A0A0J9YX44 114 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 IGKV3-11P04433 115 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 SRFP11831 508 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 RND2P52198 227 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 STARD6P59095 220 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 DRAM1Q8N682 238 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 MS4A4AQ96JQ5 239 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 ERG28Q9UKR5 140 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 TMEM91Q6ZNR0 172 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 WFDC3Q8IUB2 231 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 MGST3O14880 152 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 INO80CQ6PI98 192 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 FAM19A2Q8N3H0 131 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 CEACAM5P06731 702 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 RNASEH2CQ8TDP1 164 aaKnown RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 SSBP3Q9BWW4 388 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 IGHV3-21A0A0B4J1V1 117 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 IGKV3OR2-268A0A0C4DH90 116 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 A6NNC1 897 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 ABCA2Q9BZC7 2435 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 TCF20Q9UGU0 1960 aaKnown RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 TTC28Q96AY4 2481 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 PGLYRP1O75594 196 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-201ENST00000335551 C1QL3Q5VWW1 255 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 hCG_38984A0A1B0GV85 526 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 UCP3P55916 312 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 HCP5Q6MZN7 132 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 LINC00305Q7Z4B0 112 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 HIST1H2BLQ99880 126 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 GDF15Q99988 308 aa5.3□□□□□ -1.56
CSMD1-201ENST00000335551 CGB1A6NKQ9 187 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 ZNF688P0C7X2 276 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 TGIF1Q15583 401 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 OR11H4Q8NGC9 324 aa5.29□□□□□ -1.56
CSMD1-201ENST00000335551 FOXI3A8MTJ6 420 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms