RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 OR10W1Q8NGF6 305 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 IGLC7A0M8Q6 106 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 CLPSL1A2RUU4 121 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 RBMXL2O75526 392 aaKnown RBP13.73□□□□□ -0.21
CHGA-202ENST00000334654 SIX6O95475 246 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 PROK1P58294 105 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 IL15RAQ13261 267 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 CXorf66Q5JRM2 361 aaPredicted RBP13.73□□□□□ -0.21
CHGA-202ENST00000334654 C10orf99Q6UWK7 81 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 TCTE3Q8IZS6 198 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 OR4D5Q8NGN0 318 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 FYTTD1Q96QD9 318 aaKnown RBP13.73□□□□□ -0.21
CHGA-202ENST00000334654 SPIN2AQ99865 258 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 SPIN2BQ9BPZ2 258 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 HSPB7Q9UBY9 170 aa13.73□□□□□ -0.21
CHGA-202ENST00000334654 TRAV41A0A0B4J266 112 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 SOX15O60248 233 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 APELAP0DMC3 54 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 AREGP15514 252 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 PRCDQ00LT1 54 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 WT1-ASQ06250 92 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 IAH1Q2TAA2 248 aaPredicted RBP13.72□□□□□ -0.21
CHGA-202ENST00000334654 SPINK9Q5DT21 86 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 ARSJQ5FYB0 599 aaPredicted RBP13.72□□□□□ -0.21
CHGA-202ENST00000334654 ZBTB8BQ8NAP8 495 aaPredicted RBP13.72□□□□□ -0.21
CHGA-202ENST00000334654 OR5M8Q8NGP6 311 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 ABHD5Q8WTS1 349 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 WDR89Q96FK6 387 aaPredicted RBP13.72□□□□□ -0.21
CHGA-202ENST00000334654 ST6GAL2Q96JF0 529 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 RNF114Q9Y508 228 aa13.72□□□□□ -0.21
CHGA-202ENST00000334654 C13orf42A0A1B0GVH6 325 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 GOSR2O14653 212 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 NXPH3O95157 252 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 H2BFSP57053 126 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 SPCS3P61009 180 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 ID3Q02535 119 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 TNFRSF9Q07011 255 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 ECSCRQ19T08 205 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 THOC7Q6I9Y2 204 aaKnown RBP13.71□□□□□ -0.21
CHGA-202ENST00000334654 C11orf87Q6NUJ2 197 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 UNQ5815/PRO19632Q6UWF5 114 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 OR1S1Q8NH92 325 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 C19orf24Q9BVV8 132 aa13.71□□□□□ -0.21
CHGA-202ENST00000334654 IFNA17P01571 189 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 CXCL3P19876 107 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 TMEM267Q0VDI3 215 aaPredicted RBP13.7□□□□□ -0.22
CHGA-202ENST00000334654 FOXL1Q12952 345 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 FCN2Q15485 313 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 GSG1LQ6UXU4 331 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 ZNF329Q86UD4 541 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 TTC9CQ8N5M4 171 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 OR11H7Q8NGC8 314 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 C2orf50Q96LR7 162 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 TMEM68Q96MH6 324 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 SRSF8Q9BRL6 282 aaKnown RBP13.7□□□□□ -0.22
CHGA-202ENST00000334654 HINT2Q9BX68 163 aa13.7□□□□□ -0.22
CHGA-202ENST00000334654 A0A1B0GUS0 222 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 C5orf51A6NDU8 294 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 FAM25EA8MYX2 175 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 FAM90A26D6RGX4 464 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 INS-IGF2F8WCM5 200 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 CRYGCP07315 174 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 C19orf35Q6ZS72 473 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 KLHDC1Q8N7A1 406 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 OR5T1Q8NG75 326 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 MGAT4CQ9UBM8 478 aa13.69□□□□□ -0.22
CHGA-202ENST00000334654 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 IGHG4P01861 327 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 REG1AP05451 166 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 CTRB1P17538 263 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 RIPPLY3P57055 190 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 KRTAP10-3P60369 221 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 CTRB2Q6GPI1 263 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 FAM110DQ8TAY7 271 aaPredicted RBP13.68□□□□□ -0.22
CHGA-202ENST00000334654 RBKSQ9H477 322 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 GSKIPQ9P0R6 139 aa13.68□□□□□ -0.22
CHGA-202ENST00000334654 A0A1W2PN81 502 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 NPIPB5A8MRT5 1133 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 MBPP02686 304 aaPredicted RBP13.67□□□□□ -0.22
CHGA-202ENST00000334654 GIPP09681 153 aaPredicted RBP13.67□□□□□ -0.22
CHGA-202ENST00000334654 OR13C7P0DN81 318 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 PSMB6P28072 239 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 CHRNA7P36544 502 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 SRSF4Q08170 494 aaKnown RBP13.67□□□□□ -0.22
CHGA-202ENST00000334654 KLK9Q2XQG4 91 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 TCTEX1D4Q5JR98 221 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 CENPVQ7Z7K6 275 aaPredicted RBP13.67□□□□□ -0.22
CHGA-202ENST00000334654 OR2C3Q8N628 320 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 TMEM158Q8WZ71 300 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 PDCD10Q9BUL8 212 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 MAGT1Q9H0U3 335 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 CACFD1Q9UGQ2 172 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 KLK9Q9UKQ9 250 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 DMRT1Q9Y5R6 373 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 STAB1Q9NY15 2570 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 FBXO24O75426 580 aa13.67□□□□□ -0.22
CHGA-202ENST00000334654 NKX2-1P43699 371 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms