RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TMEM56-RWDD3S4R434 201 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 COL11A1P12107 1806 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 T-ENOLP0DO92 83 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 KLF5Q13887 457 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 SFTA2Q6UW10 78 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 CNOT1A5YKK6 2376 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 C1QAP02745 245 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 CELA2BP08218 269 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 PDE6GP18545 87 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZNF252P-AS1Q0IIN9 211 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 XAF1Q6GPH4 301 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 ACP7Q6ZNF0 438 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 GAPTQ8N292 157 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 TPRX1Q8N7U7 411 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 NEIL2Q969S2 332 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 DSCR8Q96T75 97 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 PEAK1Q9H792 1746 aa5.21□□□□□ -1.58
CDC42BPA-201ENST00000334218 GRIFINA4D1Z8 144 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 IGKCP01834 107 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 NOVP48745 357 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 NRN1LQ496H8 165 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 DCAF12L2Q5VW00 463 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAAP20Q6NZ36 180 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 LCNL1Q6ZST4 164 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 DMRTC2Q8IXT2 367 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 GSTO2Q9H4Y5 243 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 RNF11Q9Y3C5 154 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 FLG2Q5D862 2391 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZNF840PA6NDX5 716 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 P2RY2P41231 377 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 PMP22Q01453 160 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 IRF3Q14653 427 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 TEPPQ6URK8 271 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 SPTSSBQ8NFR3 76 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 A0A1B0GUT8 65 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 GPX2P18283 190 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 PRSS45Q7RTY3 260 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 OR52N5Q8NH56 324 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 TM4SF18Q96CE8 201 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZIC5Q96T25 663 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 GDF15Q99988 308 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 RNF122Q9H9V4 155 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 PTPRDP23468 1912 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 SEMA5BQ9P283 1151 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 OBSL1O75147 1896 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 TANC1Q9C0D5 1861 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 TRAV24A0A0B4J272 114 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 SMIM9A6NGZ8 99 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 NDUFA7O95182 113 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 TDGF1P13385 188 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 ADRA1AP35348 466 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 OR11H6Q8NGC7 330 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 OTORQ9NRC9 128 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 LY96Q9Y6Y9 160 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 BTAF1O14981 1849 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 C1QCP02747 245 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 ELANEP08246 267 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 FUSP35637 526 aaKnown RBP eCLIP5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM90A2PQ658T7 463 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 C3orf22Q8N5N4 141 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 SCAMP5Q8TAC9 235 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 SUSD3Q96L08 255 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 ATOH8Q96SQ7 321 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 PKD1L3Q7Z443 1732 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 NPFFO15130 113 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 FUT5Q11128 374 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM74A4Q5TZK3 123 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 SIGLEC15Q6ZMC9 328 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 DNAJC19Q96DA6 116 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 JPT1Q9UK76 154 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 LILRA5A6NI73 299 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 LEPROTO15243 131 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 TMEM91Q6ZNR0 172 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 DTX1Q86Y01 620 aa5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 ADAD2Q8NCV1 583 aaKnown RBP5.2□□□□□ -1.58
CDC42BPA-201ENST00000334218 NCR2O95944 276 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 RPS11P62280 158 aaKnown RBP eCLIP5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 ZNF660Q6AZW8 331 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 RNF39Q9H2S5 420 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 PSG9Q00887 426 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 SP5Q6BEB4 398 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 FAM166AQ6J272 317 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 MMD2Q8IY49 270 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 BCL6BQ8N143 479 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 SNRPCP09234 159 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 PNLIPP16233 465 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 FOXL1Q12952 345 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 TEX45Q8NA69 505 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 NFAM1Q8NET5 270 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 C8orf46Q8TAG6 207 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 IZUMO1RA6ND01 250 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 CEACAM18A8MTB9 384 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 RND3P61587 244 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 RAE1P78406 368 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 MED25Q71SY5 747 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 VGLL1Q99990 258 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 WNT10AQ9GZT5 417 aa5.19□□□□□ -1.58
CDC42BPA-201ENST00000334218 PLXNA3P51805 1871 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms