RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ABCA1O95477 2261 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 AKAP13Q12802 2813 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 MGST3O14880 152 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 MLANAQ16655 118 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 C17orf58Q2M2W7 97 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 MBNL2Q5VZF2 373 aaKnown RBP10.12□□□□□ -0.79
VPS33B-201ENST00000333371 RPRMLQ8N4K4 120 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 FAM216AQ8WUB2 273 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 DDB2Q92466 427 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 STARD4Q96DR4 205 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 NPVFQ9HCQ7 196 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 ZNF71Q9NQZ8 489 aaPredicted RBP10.12□□□□□ -0.79
VPS33B-201ENST00000333371 DKK4Q9UBT3 224 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 POLR3KQ9Y2Y1 108 aaPredicted RBP10.12□□□□□ -0.79
VPS33B-201ENST00000333371 DYSFO75923 2080 aa10.12□□□□□ -0.79
VPS33B-201ENST00000333371 MPDU1O75352 247 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 MMP23AO75900 390 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 CD99P14209 185 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 LINC00310P59036 64 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 ZNF90Q03938 601 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 TDRG1Q3Y452 100 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 LYG1Q8N1E2 194 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 ITLN1Q8WWA0 313 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 PLSCR4Q9NRQ2 329 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 PTPRZ1P23471 2315 aaPredicted RBP10.11□□□□□ -0.79
VPS33B-201ENST00000333371 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 M0R1B8 84 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 NPY1RP25929 384 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 NBL1P41271 181 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 RPP30P78346 268 aaKnown RBP10.11□□□□□ -0.79
VPS33B-201ENST00000333371 BHLHA15Q7RTS1 189 aaPredicted RBP10.11□□□□□ -0.79
VPS33B-201ENST00000333371 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 NOL4LQ96MY1 436 aaPredicted RBP10.11□□□□□ -0.79
VPS33B-201ENST00000333371 MS4A10Q96PG2 267 aa10.11□□□□□ -0.79
VPS33B-201ENST00000333371 SLC35B1P78383 322 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 IQCJQ1A5X6 159 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 KRTCAP3Q53RY4 240 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 TEPPQ6URK8 271 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 SEM1Q6ZVN7 128 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 LRFN3Q9BTN0 628 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 PIEZO2Q9H5I5 2752 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 BSNQ9UPA5 3926 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 SPTBN2O15020 2390 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 POLEQ07864 2286 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 F2RL2O00254 374 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 TMPRSS3P57727 454 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 TMEM249Q2WGJ8 235 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 TRAT1Q6PIZ9 186 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 OR52E5Q8NH55 327 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 C2orf88Q9BSF0 95 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 IDI2-AS1Q9NZ38 188 aa10.1□□□□□ -0.79
VPS33B-201ENST00000333371 IGKV1OR2-108A0A075B7D4 117 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 ZNF705FA8MVS1 300 aaPredicted RBP10.09□□□□□ -0.79
VPS33B-201ENST00000333371 TM4SF5O14894 197 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 IGKV1-16P04430 117 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 ZNF705DP0CH99 300 aaPredicted RBP10.09□□□□□ -0.79
VPS33B-201ENST00000333371 ZNF705BP0CI00 300 aaPredicted RBP10.09□□□□□ -0.79
VPS33B-201ENST00000333371 CCKARP32238 428 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 IER3P46695 156 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 RAB4BP61018 213 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 IGFL3Q6UXB1 125 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 DOLPP1Q86YN1 238 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 OR4S2Q8NH73 311 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 SNHG12Q9BXW3 62 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 SLC25A15Q9Y619 301 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 OR10J4P0C629 311 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 FXYD3Q14802 87 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 ZGRF1Q86YA3 2104 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 MRPL18Q9H0U6 180 aaKnown RBP10.09□□□□□ -0.79
VPS33B-201ENST00000333371 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 FAM90A9PA6NNJ1 464 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 SRRM4A7MD48 611 aaKnown RBP10.09□□□□□ -0.79
VPS33B-201ENST00000333371 SERF1AO75920 110 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 LINC00869P0C866 280 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 CRYBB3P26998 211 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 CDKN1AP38936 164 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 SSTP61278 116 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 HSPE1P61604 102 aaKnown RBP10.09□□□□□ -0.79
VPS33B-201ENST00000333371 RHOBP62745 196 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 PSG5Q15238 335 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 C22orf34Q6ZV56 151 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 Q6ZWC4 215 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 CMTM2Q8TAZ6 248 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 RND1Q92730 232 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 TBX15Q96SF7 602 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 RNASE7Q9H1E1 156 aaKnown RBP10.09□□□□□ -0.79
VPS33B-201ENST00000333371 TMEM14BQ9NUH8 114 aa10.09□□□□□ -0.79
VPS33B-201ENST00000333371 TPRP12270 2363 aaKnown RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 MBD3L4A6NDZ8 208 aaPredicted RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 MBD3L3A6NE82 208 aaPredicted RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 MBD3L5A6NJ08 208 aaPredicted RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 CGB3P0DN86 165 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 CGB7P0DN87 165 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 TCL1AP56279 114 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 MRPS11P82912 194 aaKnown RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 Q6ZS92 163 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 OR8I2Q8N0Y5 310 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 FAM216BQ8N7L0 139 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 OR1L6Q8NGR2 347 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms