RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PSPNO60542 156 aa10.87□□□□□ -0.67
VSTM4-202ENST00000332853 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
VSTM4-202ENST00000332853 IGHV3OR16-8A0A075B7F1 116 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 TEX50A0A1B0GTY4 177 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 FOSL1P15407 271 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 ZNF506Q5JVG8 444 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 DYNLRB2Q8TF09 96 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 HSPB7Q9UBY9 170 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 A8MXK9 166 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 NPIPB11E5RHQ5 1161 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 IL4P05112 153 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 SAA1P0DJI8 122 aaPredicted RBP10.86□□□□□ -0.67
VSTM4-202ENST00000332853 TMEM30BQ3MIR4 351 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 IFI27L2Q9H2X8 130 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 IGHV3-49A0A0A0MS15 119 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 ATP5G3P48201 142 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 Q6ZN92 141 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 CACNA1DQ01668 2161 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 OR9G9P0C7N8 305 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 SMIM6P0DI80 62 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 MPZP25189 248 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 SPANXN1Q5VSR9 72 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 ZNF738Q8NE65 137 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 TMEM177Q53S58 311 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
VSTM4-202ENST00000332853 OSR1Q8TAX0 266 aaPredicted RBP10.86□□□□□ -0.67
VSTM4-202ENST00000332853 MRPL18Q9H0U6 180 aaKnown RBP10.86□□□□□ -0.67
VSTM4-202ENST00000332853 SCO2A0A1W2PP80 73 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 TMEM116Q8NCL8 245 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 SFRP2Q96HF1 295 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 PROK2Q9HC23 129 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 YPEL1O60688 119 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 LHFPL1Q86WI0 220 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.85□□□□□ -0.67
VSTM4-202ENST00000332853 YPEL2Q96QA6 119 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 COX19Q49B96 90 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 CENPWQ5EE01 88 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
VSTM4-202ENST00000332853 MIR17HGQ75NE6 70 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 OR4D5Q8NGN0 318 aa10.85□□□□□ -0.67
VSTM4-202ENST00000332853 FOXA2Q9Y261 457 aaPredicted RBP10.85□□□□□ -0.67
VSTM4-202ENST00000332853 OR2T8A6NH00 312 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 A8MWL6 223 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 RNASE6Q93091 150 aaKnown RBP10.84□□□□□ -0.67
VSTM4-202ENST00000332853 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
VSTM4-202ENST00000332853 DPM3Q9P2X0 92 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 E9PQ18 207 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 AMY1AP04745 511 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 TMEM78Q5T7P6 136 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 CLDND2Q8NHS1 167 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 RFNGQ9Y644 331 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 DNM1P46Q6ZS02 220 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 CD177Q8N6Q3 437 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
VSTM4-202ENST00000332853 LINC00205P59089 165 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 MEF2CQ06413 473 aaPredicted RBP10.84□□□□□ -0.67
VSTM4-202ENST00000332853 NEU1Q99519 415 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 C2orf16Q68DN1 1984 aa10.84□□□□□ -0.67
VSTM4-202ENST00000332853 ZNF98A6NK75 572 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 CDK2AP1O14519 115 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 MBNL2Q5VZF2 373 aaKnown RBP10.83□□□□□ -0.68
VSTM4-202ENST00000332853 TBX15Q96SF7 602 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 TXNDC17Q9BRA2 123 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 VSIRQ9H7M9 311 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 TRGC1P0CF51 173 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 PRB4P10163 310 aaPredicted RBP10.83□□□□□ -0.68
VSTM4-202ENST00000332853 SLC25A15Q9Y619 301 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 A0A0G2JNJ9 132 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 SLC17A3O00476 420 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 SRSF12Q8WXF0 261 aaKnown RBP10.83□□□□□ -0.68
VSTM4-202ENST00000332853 Q9UFV3 132 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 ID1P41134 155 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 TMEM97Q5BJF2 176 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 OR1P1Q8NH06 330 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 FOXH1O75593 365 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 ACAA1P09110 424 aaPredicted RBP10.83□□□□□ -0.68
VSTM4-202ENST00000332853 DUTP33316 252 aaKnown RBP10.83□□□□□ -0.68
VSTM4-202ENST00000332853 ESPL1Q14674 2120 aa10.83□□□□□ -0.68
VSTM4-202ENST00000332853 DIRC3C9JPN6 131 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 GATAD1Q8WUU5 269 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 SMAD7O15105 426 aaKnown RBP10.82□□□□□ -0.68
VSTM4-202ENST00000332853 TIMP3P35625 211 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 CCL20P78556 96 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 MRPL32Q9BYC8 188 aaKnown RBP10.82□□□□□ -0.68
VSTM4-202ENST00000332853 CARHSP1Q9Y2V2 147 aaKnown RBP10.82□□□□□ -0.68
VSTM4-202ENST00000332853 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 NEU4Q8WWR8 484 aaPredicted RBP10.82□□□□□ -0.68
VSTM4-202ENST00000332853 LRRK1Q38SD2 2015 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 OR10J6PQ8NGY7 276 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 TRAV30A0A087WSZ9 112 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 CBY3A6NI87 242 aa10.82□□□□□ -0.68
VSTM4-202ENST00000332853 PAFAH1B2P68402 229 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms