RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 K7ESF4 209 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 KLF14Q8TD94 323 aaPredicted RBP11.84□□□□□ -0.51
EPHB3-201ENST00000330394 TMEM70Q9BUB7 260 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 CLEC5AQ9NY25 188 aa11.84□□□□□ -0.51
EPHB3-201ENST00000330394 CTSSP25774 331 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 TM4SF20Q53R12 229 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 DCAF10Q5QP82 559 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 LDLRAD2Q5SZI1 272 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 LINC01551Q86U37 167 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 VSTM2AQ8TAG5 236 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 NPIPB3Q92617 1050 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 RPEQ96AT9 228 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 CLDN16Q9Y5I7 305 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 A0A1B0GW64 132 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 PRB4P10163 310 aaPredicted RBP11.83□□□□□ -0.52
EPHB3-201ENST00000330394 CFHR1Q03591 330 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 ZNF441Q8N8Z8 693 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 OR13A1Q8NGR1 328 aa11.83□□□□□ -0.52
EPHB3-201ENST00000330394 TMEM210A6NLX4 147 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 TMEM97Q5BJF2 176 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 J3KRW8 73 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 TNFSF13O75888 250 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 IGKV1-5P01602 117 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 LINC00205P59089 165 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 TMEM116Q8NCL8 245 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 C1QTNF5Q9BXJ0 243 aa11.82□□□□□ -0.52
EPHB3-201ENST00000330394 TRAV1-1A0A0B4J248 108 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 CIDEAO60543 219 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 PCSK4Q6UW60 755 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 UNQ6494/PRO21346Q6UXR6 183 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 CALYQ9NYX4 217 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 MUC21A0A0G2JKD1 596 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 MUC21A0A140T8X8 626 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 CD40P25942 277 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 MUC21Q5SSG8 566 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 FAM201AQ5SY85 155 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 NIT1Q86X76 327 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 ZIC4Q8N9L1 334 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 SRSF12Q8WXF0 261 aaKnown RBP11.81□□□□□ -0.52
EPHB3-201ENST00000330394 RNF166Q96A37 237 aaPredicted RBP11.81□□□□□ -0.52
EPHB3-201ENST00000330394 ZPBPQ9BS86 351 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 TRBV9A0A0B4J1U6 114 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 RBFOX2O43251 390 aaKnown RBP eCLIP11.81□□□□□ -0.52
EPHB3-201ENST00000330394 HYPMO75409 117 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 Q1RN00 199 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 NABP1Q96AH0 204 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 TIMP3P35625 211 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 RPL8P62917 257 aaKnown RBP11.81□□□□□ -0.52
EPHB3-201ENST00000330394 INO80CQ6PI98 192 aaPredicted RBP11.81□□□□□ -0.52
EPHB3-201ENST00000330394 STXBP6Q8NFX7 210 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 RASL11BQ9BPW5 248 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
EPHB3-201ENST00000330394 NPSP0C0P6 89 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 CRYGSP22914 178 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 TRAV17A0A0B4J275 112 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 ZNF324O75467 553 aaPredicted RBP11.8□□□□□ -0.52
EPHB3-201ENST00000330394 MOSP00540 346 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 PEAR1Q5VY43 1037 aaPredicted RBP11.8□□□□□ -0.52
EPHB3-201ENST00000330394 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
EPHB3-201ENST00000330394 NCOA6Q14686 2063 aaPredicted RBP11.8□□□□□ -0.52
EPHB3-201ENST00000330394 SLC25A17O43808 307 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 ACP1P24666 158 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 SCGB1D4Q6XE38 83 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 ZNF841Q6ZN19 808 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 FADS6Q8N9I5 356 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 TNFRSF19Q9NS68 423 aa11.8□□□□□ -0.52
EPHB3-201ENST00000330394 PRRG2O14669 202 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 CFPP27918 469 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 TDGF1P3P51864 188 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 ZFP30Q9Y2G7 519 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 PPIAL4DF5H284 164 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 CELA3BP08861 270 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 DMRTC2Q8IXT2 367 aaPredicted RBP11.79□□□□□ -0.52
EPHB3-201ENST00000330394 GNG7O60262 68 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 PFN1P07737 140 aaKnown RBP11.79□□□□□ -0.52
EPHB3-201ENST00000330394 CSRP1P21291 193 aaKnown RBP11.79□□□□□ -0.52
EPHB3-201ENST00000330394 FBLN7Q53RD9 439 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 CHRNA10Q9GZZ6 450 aa11.79□□□□□ -0.52
EPHB3-201ENST00000330394 POLR3KQ9Y2Y1 108 aaPredicted RBP11.79□□□□□ -0.52
EPHB3-201ENST00000330394 LINC00271P0C7V0 271 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 LPAR2Q9HBW0 351 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 FABP2P12104 132 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 WFDC3Q8IUB2 231 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 SIGLEC12Q96PQ1 595 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 NAA38Q9BRA0 125 aaKnown RBP11.78□□□□□ -0.52
EPHB3-201ENST00000330394 AP5S1Q9NUS5 200 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 ONECUT1Q9UBC0 465 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 HIGD1CA8MV81 97 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 M0R296 226 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 TCF24Q7RTU0 167 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 DIRC2Q96SL1 478 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 ANAPC1Q9H1A4 1944 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms